Natrinema longum: J0X27_12550
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Entry
J0X27_12550 CDS
T07116
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hlo
Natrinema longum
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlo03009
]
J0X27_12550
Ribosome biogenesis [BR:
hlo03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
J0X27_12550
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
AAA_16
AAA_22
AAA
Rad17
AAA_23
nSTAND3
Fer4_6
Fer4
AAA_24
Fer4_7
LdpA_Fe-S-bd
Motif
Other DBs
NCBI-ProteinID:
QSW84276
UniProt:
A0A8A2U6M7
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All DBs
Position
2545638..2547452
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AA seq
604 aa
AA seq
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MADDSIAVVDLDRCQPDRCSYECKNYCPPNRTGKECITLRGEEAAEGQPEQIHISEEICL
GETCGICVEKCPFDAIEIINLPQELQDEPVHRYGENAFSLYGLPAPQEGQVTGILGPNGI
GKTTAVRILAGELEPNLGRHEAAPGWDEVLEAYRGTELQDYIADVRDGDITIARKPQYVD
QIPNSFDGNTRQLLERTDERGALDELVERLSIGPVMEQSIDDLSGGELQRVAIAATLARD
TDFYFLDEVTPYLDIGQRVTAARLIRELAEEEDKSVLVVEHDLAILDLLADTLHVAYGEP
GAYGVITSPKSVRNGINEYLSGYLDNENMRIRPNPIEFEEHAPRSVTRADTLVEYPDLTK
SYGDGEFSLEVEGGTIRENEVLGVVGPNGIGKSTFAKLLTGNLGPDEGDADLDLNISYKP
QYVTIDQHMRVDAFLSSITDQFGSSYWNTEIAQPLQLERIMEQNLSDLSGGERQRVAIAA
CLSDSADLYLLDEPSAHLDVEQRVQAAKAIRRFAEQQDATVMVIDHDIYMMDLLADRLMV
FDGEPAVHGRAGQPQQMRDGMNEFLANLEVTFRRDERTSRPRINKPESQLDRQQKSEGEY
YYAP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatagcatcgccgtcgtagacctagatcggtgtcagcccgaccggtgtagc
tacgagtgcaagaactactgtccgccgaatcgcacggggaaagagtgtatcacgcttcgc
ggcgaggaggccgcggaaggccaacccgagcagatccacatctccgaggagatctgtctg
ggcgaaacctgtggtatctgcgtcgagaagtgtccgttcgacgccatcgagatcatcaac
ctcccgcaggaactgcaagacgagccggtccaccgctacggcgagaacgccttctcgctg
tacggccttcccgcgccacaggaggggcaggtcaccggtattctcggccccaacgggatc
gggaagacgacggccgtccggatcctcgccggcgaactcgagcccaacctcggccgtcac
gaagcggcgccgggatgggacgaggtcctggaagcgtaccgcgggaccgagctacaggac
tacatcgccgacgtgcgcgacggtgacatcacgatcgcacgcaagccccagtacgtcgat
cagatcccgaacagtttcgacggcaacacccgtcagctactcgagcggaccgacgagcgg
ggtgccctcgacgaactggtcgagcggctctcgatcggccccgtcatggagcagtcgatc
gacgacctctccggtggagagttgcagcgtgtagccatcgcggccacgctcgcccgggat
acggacttctacttcctcgacgaggtgacaccgtatctggacatcggtcagcgagtcact
gcggcacgcctgatccgcgaactcgccgaagaggaagacaagtccgtcctcgtcgtcgaa
cacgacctcgcaatcttggacctgctcgcggacacgctccacgttgcctacggtgagccg
ggtgcctacggtgtgatcacctcgcccaagtccgtccgcaacgggatcaacgagtacctc
tcgggctatctggacaacgagaacatgcggatccggcccaacccgatcgagttcgaggaa
cacgcgcctcgaagcgtgacccgcgccgacacgctcgtcgagtacccggaccttacgaag
agctacggcgacggcgagttcagcctcgaggtcgagggcggcacgatccgggagaacgaa
gtcctgggcgtcgtcggccccaacgggatcgggaagtcgaccttcgccaagttgctgacc
gggaacctcgggccggacgaaggcgacgccgatctcgatctgaacatctcgtataaaccc
cagtacgtcaccatcgaccagcacatgcgggtcgacgccttcctctcctcgatcaccgac
cagttcggctcgtcctactggaacaccgagatcgcccagcccctccagttggaacggatc
atggagcagaacctctccgatctctccggcggtgaacgccagcgggtcgcgattgcggcc
tgcctctccgattcggcggatctctacctgctcgacgagccctccgcacacctcgacgtc
gaacagcgggtccaggccgcgaaggcgatccggcgcttcgccgaacagcaggatgccacc
gtgatggtcatcgatcacgacatctacatgatggacctgctcgcggaccggctgatggtc
ttcgacggcgaacccgccgtccacggccgtgccggccagccacagcagatgcgcgacggc
atgaacgagttcctcgcgaacctcgaggtcacgttccgccgggacgagcgcacctctcga
ccccggatcaacaagcccgagtcgcagctggatcgccagcagaaaagcgagggcgagtac
tactacgcgccgtaa
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