KEGG   Natrinema longum: J0X27_12745
Entry
J0X27_12745       CDS       T07116                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hlo  Natrinema longum
Brite
KEGG Orthology (KO) [BR:hlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hlo03400]
    J0X27_12745
Enzymes [BR:hlo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J0X27_12745
    5.6.2.6  RNA 3'-5' helicase
     J0X27_12745
DNA repair and recombination proteins [BR:hlo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    J0X27_12745
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 HypA DUF116 Zn_ribbon_8 Zn_ribbon_PaaD
Other DBs
NCBI-ProteinID: QSW84315
UniProt: A0A8A2U7U9
LinkDB
Position
complement(2577562..2580402)
AA seq 946 aa
MTEGDVAAFTHLGATVRGALSERGFSQPTAPQRLAIPPLSAGENTLVIAPTGSGKTETAM
LPVFDHLVAEEGPPEGFGALYITPLRALNRDMRERLEWWGEYLDLEVDVRHGDTTDYQRS
KQAEDPPDVLITTPETVQAMLTGERLREALQDVSHVVIDEVHELAASKRGAQLAIGLERL
HDLAGRFQRIGLSATVGDPGAVGQFLTGGRPCEIREIDVGSNVDVTVREPEITEADERLA
GELMTEADTASHVRLIRDLVADHESTLIFVNTRQTAEALGSRFKELDLPIGVHHGSLSKE
ARIDVEDRFKAGELDGLLCTSSMELGIDVGQVDHVIQYKSPRQVTRLLQRIGRAGHRQDE
VSRGTIVTTRPDDTFEALSIARRARDGEVEPAAIHEGSLDVVANQLPAIVQSRGDTYVDE
AVETVTRSYPFRNVPETTIREIVEELDRNRVLWFDEGEDRIETTGGTWQYVYANLSMIPD
EETYEVHDIASGGQIGTLDERFVVNFAQPGEVFIQRGEMWRIAEIDDEEARVKVSPIEDP
AGEVPSWIGQEIPVPAAVAGEVGEIRAVAEPQLGAGADAAAVGRELAGRYPADEYTLTEA
CEQLEAQVDADAPMPTADRLVLERQGRTIVLNAPFGHMANETLGRVLSALLGQQAGSSVG
LETDPYRIELEVPTSIATSDVIEVLEETDPDHVEAIVELGLKRSDALAFRLAQVSAKFGA
LKRWQNQGSGRLSNDRLLSALEDTPMYEEAIREVFHEDLDIDRASSVLAGIQSGALELVT
HRGRTPVGQGGRSSGGKELLAPENADASVIETVRERIQNDRVILLCTHCTEWNVKTKVKR
VRDQPECPECGSTRIASLNPWADEVVQAVRAQEKDDEQREMTERAFRAASLVQSHGKQAV
IAMAARGVGPHNAAQIINKLREDDAEFYRDILAKEREYARTQAFWD
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgactgagggggacgtcgcggcgtttacgcatctcggagcgacggttcgcggtgcgctc
tccgaacgcgggttctcgcagccgacggctccacagcgactggcgattccgccgctgtcg
gccggcgagaacacgctcgtgatcgcgcccaccgggagcggcaagaccgagacggcgatg
ttgcccgtcttcgaccacctcgtcgccgaggaggggccacccgaggggttcggcgcgctc
tacatcaccccgctgcgggccctgaaccgcgacatgcgcgagcgcctcgagtggtggggc
gagtacctggatctcgaggtcgacgtccgccacggcgacaccacggactaccagcggagc
aagcaagccgaggacccgccggacgtgctgatcacgacgcccgagaccgtccaggcgatg
ctcaccggcgagcggctgcgcgaggcgctacaggacgtctcccacgtcgtgatcgacgaa
gtccacgaactcgccgcgtccaagcgcggtgcgcaactggcgatcggcctcgagcgactc
cacgacctcgccgggcggttccagcggatcggcctctcggcgacggtcggcgatccggga
gcggtcgggcagttcctcacgggcggtcgcccctgcgagatcagggagatcgacgtcggg
agcaacgtcgacgtgacggtccgcgaaccggagatcaccgaggctgacgagcgattggcc
ggcgagctcatgaccgaagccgacacggccagccacgtccgactgatccgggacctggtc
gcggaccacgagtcgacgctgatcttcgtgaatacgcgccagacggcggaggcgctgggg
tcgcgattcaaggagctcgacttaccgatcggggtccaccacggctcgctctcgaaggag
gcccgaatcgacgtcgaggatcggttcaaggccggcgaactcgacgggttgctgtgtacg
tcctcgatggagctcgggatcgacgtcggacaggtcgatcacgtgatccagtacaagagc
ccgcggcaggtcactcgactcctccagcggatcggccgcgcggggcatcgccaggacgag
gtctcgaggggcacgatcgtcacgacgcggcccgacgatacgttcgaggcgctgtcgatc
gctcgtcgggctcgcgacggcgaggtcgagccggcggcgatccacgaggggagcctggac
gtcgtcgcgaatcagttgccggcgatcgtccagagccgcggggacacgtacgtcgacgag
gcagtcgagaccgtcacgcggtcgtatccgttccggaacgtgcccgagacgacgatccgc
gagatcgtggaggaactggaccgtaaccgggtcctctggttcgacgagggcgaggaccgc
atcgagaccaccggcggcacctggcagtacgtctacgcgaacctctcgatgatccccgac
gaggagacctacgaggtccacgacatcgcctcggggggccagatcgggaccctggacgaa
cgcttcgtcgtcaacttcgcccagcccggcgaagtgttcatccaacggggcgagatgtgg
cggatcgcggagatcgacgacgaggaggcgcgggtcaaggtcagcccgatcgaggacccc
gccggcgaggtgccctcctggatcggccaggagatccccgtccccgccgcggtcgcgggc
gaggtcggcgagatccgggccgtcgcggaaccgcaactcggagccggggccgacgccgct
gcggtcggtcgcgaactcgcaggccgctatccggccgacgagtacacgctaaccgaggcc
tgcgagcaactcgaggcccaggtcgacgccgacgcaccgatgccgacggcggatcgactg
gtgctcgagcgacaggggcggacgatcgtgctcaacgcacccttcggccacatggccaac
gagacgctcggccgggtcctctcggcactgctgggccagcaggcgggctcctcggtcggc
ctcgagaccgatccctaccggatcgaactcgaagtgccgacttcgatcgcgaccagcgac
gtgatcgaggtactcgaggagaccgatcccgaccacgtcgaggcgatcgtcgaactcgga
ctcaagcgctcggacgcgctcgccttccggctcgcacaggtctccgcgaagttcggcgcg
ctcaaacgctggcagaaccagggatcgggccggctctcgaacgatcgcttgctgtcggca
ctcgaggacacgccgatgtacgaggaggcgatccgggaggtgttccacgaggatctcgat
atcgaccgcgcgagttcggtgctcgcggggatccagtcgggcgcgctcgagttggtgacc
catcgcgggcggacgccggtcggacagggcggtcgatcctcggggggcaaggaactgctc
gcgcccgagaacgccgacgcgagcgtcatcgagacggtccgggagcggatccagaacgat
cgggtcatcctgctctgtacccactgcacggagtggaacgtgaagacgaaggtcaaacgg
gtccgcgaccagccggagtgtcccgagtgcgggtcgacccggatcgcgtcgctgaacccg
tgggccgacgaggtcgtccaggccgtcagggctcaggagaaagacgacgagcaacgagag
atgacggagcgagcgttccgggccgcgagcctcgtccagagccacggcaaacaggccgtg
atcgcgatggctgcccgcggcgttgggccgcacaacgccgcacagatcatcaacaaactc
cgcgaggacgacgccgaattctatcgcgacatcctcgcgaaagagcgggagtacgcccgt
acgcaggcgttctgggactga

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