Natrinema longum: J0X27_13220
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Entry
J0X27_13220 CDS
T07116
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hlo
Natrinema longum
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlo03400
]
J0X27_13220
Enzymes [BR:
hlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J0X27_13220
DNA repair and recombination proteins [BR:
hlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
J0X27_13220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QSW84405
UniProt:
A0A8A2U834
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All DBs
Position
2668045..2671788
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AA seq
1247 aa
AA seq
DB search
MGDDPRRESSGGQDLEPGADPDDDTFDTAATAGLASADEIEPKGNQKAVIDSRAACTSVD
AGAGTGKTTTMLVRIERAIERGEVDPEDVLVLTFANEAAASIRTAVGERLDPDAAAAIDV
YTYHSFCYRLVREYAYYLGYSPEFDVVTERDRRRIIGRLLAENDYDFAAASTRNDGSPTD
LVDAVDRFIQAMSQENITPDDLQSGLPPVRTLELCNEFVLWLERTAREELSFDNEALRYF
NREEYLETARESLVDYGKLVSYCREKIAEAPDAFREDDLVREIDRYLRVLQQCVTNTIEA
LSLDDRTTKHLPRALFGNEIWGAATSRIEQTPFGRLKHAVEFLRLARHYADVYADYHDHL
EAERTMDFDELVRTATGLLDDDAIADEITGQWTQVYCDEFQDTDGTQFSLLTELTDGPDR
PDLLAIGDKDQAIYGWRGTDREGLDRLADAYDDHEAIELELNFRSRQEILDLTNACDYGP
QSSKTLREDGRTAGTYDESEPSDRVVKVESDEIPQSTATQVATTVSRLLNGAADNVPQRS
LGDLAIIVRTNRHAQAVADELRNLQIPYEISGSPRGEISPGIQTVVSYLRVLVEPDADAH
LRRVLLSRYRLTEADLATLQSQSESLYDAVGDPDPDVEFEHPERLANAREHLATLERFRD
VYPLSGFLRRFRDLTRIEWFCSSDESAQFDRIERFVEAYGADAVVQSLSTEFVDALASTL
QSGGSDRTRGTRSADSVDVMTVHQAKGLEFDTVLVPYLSDEEWCVDGDYVERARYRLLAA
TLDAEIESPLLADLAAERVGEEWRVLHVALTRAENHLFLFGSDYEYDGADDELAASTAEA
CLASEIEWSVTGQRMDLWSSLTESFQQVRENYPETVVDRTTEIAASAGESPGTITYYADY
GDRPVEPLETREAIETVHRLGRQLRDGTLLPAADAASTARLEDTADDRSSGLWVPSGRRS
SALTTDTVRFPVETLASATELPVAMRHSYSAMDTHDTCARKHYLDHVVRAIDDPLESIEA
DGTVTPTADDSASRIVGTVFHDVAEEAFHREYGTLEAWREAALRQLTARDLLAHREAVFA
CIDRYFEASAPGFDRPVAEWDAIAAELPFSLENVTGVTGDVVGYVDSIRRLPDGGLAVLD
YKATAGRIDPGDAVQLSLYLRACENRFDEPVSTVGYVYVGDVDGPRVDLLEPEELPSWES
VVETLAAVDEPSFSETTPGDHCRHCPHRSLGCGPAEYAHGGDGSEDG
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgacccacggcgagagagcagcggcggacaggatctcgagccgggagcagat
ccggacgacgatacgttcgacacggcagcgaccgccggactcgcgtccgccgacgagatc
gagccgaaagggaatcagaaggcagtcatcgacagccgcgcagcctgtacgtccgtcgac
gcgggtgccggcaccgggaagacgacgacgatgctcgtccggatcgagcgcgccatcgaa
cgaggcgaggtcgatcccgaggacgtactcgtgttgacgttcgcgaacgaagccgccgcg
agcatccggacggcggtcggggagcggctcgatcccgacgcagcagccgcgatcgacgtc
tacacctaccactccttctgttaccgactcgtccgcgagtacgcctactacctcggctac
tcgcccgagttcgacgtcgtgaccgaacgggaccgccgtcggatcatcggtcgcctgctc
gccgagaacgactacgacttcgcggctgcgtcgacccgaaacgacggttcgccgaccgat
ctcgtcgacgcggtcgatcggttcatccaggcgatgagccaggagaacatcacgcccgac
gacctgcagtcggggctgccaccggttcgtaccctcgagctgtgcaacgagttcgtcctc
tggctcgagcgcacggctcgcgaggagctctccttcgacaacgaggcgctgcgctacttc
aaccgggaggagtacctcgagacggcccgggagtcgctggtcgactacggcaaactcgtc
tcctactgccgggagaaaatcgcggaggcaccggacgcgttccgcgaggacgatctggtt
cgggagatcgatcgctacctccgggtcctccagcagtgcgtgacgaacacgatcgaggcg
ctctcgctggacgaccggacgacgaaacacctgccgcgggcgctgttcgggaacgaaatc
tggggggcggcgacgagccggatcgaacagacccccttcggccggctgaaacacgccgtc
gagttcctccggctggcccgccactacgccgacgtctacgcggactatcacgaccacctc
gaggccgagcggacgatggacttcgacgagctggtacggacggcgaccggactgctcgac
gacgacgcgatcgctgacgaaatcacgggccagtggacgcaggtctactgcgacgagttt
caggacaccgatgggacccagttttcgctgctcaccgagctcaccgacggccccgatcgg
ccggatctgctcgcgatcggcgacaaggaccaggcgatctacggctggcgcggcaccgac
cgcgagggactcgatcggctggccgacgcctacgacgaccacgaggcgatcgaactcgag
ctcaacttccggtcgcgacaggagattctcgatctgaccaacgcctgcgattacggcccc
cagtcctcgaagacgctgcgggaggacggccggacggccggaacgtacgacgagtcggag
ccgtcggaccgcgtcgtcaaagtcgagagcgacgagatcccccaatcgacggcgacacag
gtcgcgacgacggtctcgcggctcctcaacggcgcggccgacaacgtcccccagcgctcg
ctgggcgatctcgcgatcatcgttcggacgaaccgccacgcacaggcggtcgccgatgaa
ctccggaacctgcagatcccctacgagatctccggctcgccgcgtggcgagatttcgccc
gggatccagaccgtggtttcgtatctccgggtgctcgtcgagccggacgcggacgctcac
ctccggcgcgtgttactctctcgctaccgactcaccgaggcggatctcgcgacgctgcag
agccaaagcgagagcttgtacgacgcggtgggagaccccgatccggacgtcgagttcgag
cacccggagcggctcgcgaacgctcgggagcacctcgcgaccctcgagcgattccgggac
gtctacccgctgtcgggattccttcgtcggtttcgggacctcactcggatcgaatggttc
tgctcgagcgacgagagcgcgcagttcgaccggatcgagcgcttcgtcgaggcctacggc
gctgacgccgtcgtccagtcgctctcgaccgagttcgtggacgcgttggcgtcgacgtta
caaagcgggggcagcgatcgaacccgcggaacgcggtccgcggacagcgtcgacgtgatg
acggtccaccaggccaagggcctcgagttcgataccgttctcgtcccctacctctcggac
gaggagtggtgtgtcgacggcgactacgtcgaacgagcccgctaccggttgctggccgcg
acgctcgacgccgagatcgagtcgccgttgctcgccgatctcgccgccgagcgggtcggc
gaggagtggcgggtgctccacgtcgcgctcacgcgagccgagaaccacctgttcctgttt
ggctccgactacgagtacgacggcgcggacgacgagctggcggcgtcgacggccgaggcc
tgcctggcgagcgagatcgagtggtcggtgaccggccagcggatggatctctggtcgtcg
ctgaccgagagcttccagcaggtgcgagagaactaccccgaaacggtcgtcgaccggacg
accgagatcgccgcatccgccggggagagccccggaaccatcacctactacgccgactac
ggtgatcgcccggtcgagcccctcgagacgcgtgaggcgatcgagacggtccaccgactg
gggcggcagcttcgcgacggcacgctgttaccggctgccgatgccgcgagcaccgctcga
ctcgaggacaccgccgacgatcgctcgagtgggctttgggtccccagcggccgtcgatcg
tccgcgctgacgaccgatacggttcgattccccgtcgaaacgctcgcgagcgcgaccgag
cttcccgtcgcgatgcgccacagctactccgcgatggacacacacgacacctgtgcccgg
aaacactacctcgatcacgtcgttcgagcgatcgacgatccgctcgaatcgatcgaggcg
gacgggacggtcacgccgacggccgacgactcggcgtcgcgaatcgtcggtacggtcttc
cacgatgtcgccgaggaggccttccatcgcgagtatgggacgctcgaggcgtggcgggaa
gccgccctgcgtcagctcaccgcacgagacttgctcgcgcaccgtgaggccgtcttcgcc
tgtatcgaccggtacttcgaggcgagcgcgcccgggttcgaccggccggtcgccgagtgg
gacgccatcgctgcggagttacccttctcgctcgagaacgtgaccggcgtgaccggggac
gtcgtcggctacgtcgactcgatcaggcggcttccggacggcgggctcgcggtcctcgac
tacaaggcgactgcggggcggatcgaccccggcgatgcagtccagttgtcgctctacctg
cgggcttgtgagaaccggttcgacgaacccgtctcgaccgtcggctacgtctacgtcggc
gacgtcgacggtccgcgcgtcgaccttctcgagcccgaggagcttccctcgtgggagtcg
gtagtcgaaacgctcgcggcggtcgacgagccgtcgttctccgagacgacgccgggcgac
cactgccggcactgtccgcatcggtcgcttggctgcgggccggcagaatacgcccacggt
ggagacggttcggaagacggctga
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