Natrinema longum: J0X27_13890
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Entry
J0X27_13890 CDS
T07116
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hlo
Natrinema longum
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hlo03000
]
J0X27_13890
Transcription factors [BR:
hlo03000
]
Prokaryotic type
Helix-turn-helix
Other families
J0X27_13890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAT
HTH_10
GAF_2
PAS_4
GAF
GAF_3
Sigma70_r4
PAS
PAS_10
HTH_11
DUF7625
PAS_8
PAS_9
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QSW84532
UniProt:
A0A8A2U823
LinkDB
All DBs
Position
2814485..2816080
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AA seq
531 aa
AA seq
DB search
MASRQDLAAATLETLPITIAVIDDDGEIRLTNRSWREFAPESEDHLGVDYVATAATADDE
HATRAVAGIERVLDGDQESFEMEYPCHSPTEKRWFMMRASRFRDGDERLVSIVHVEITER
KLAEIAAEENAQQVRDERQALEHVLERVDGLVRDVTDAAVGAETRGEIEREVCARLTETD
PYALAWIGRADVTNRRLSPQEWASEGDVSLEDDELVIGTDERHPAIRAFEDGDPHVIQDL
DAFDDADRWWPAEAGEHVRSIIALPLTYGEITYGVLVVFAADPEAFDERERFVLESLAET
IATAMNALEVRRMLTTETVVSMAVSLEDPSLFVTALSTAVDATITYRGVTYDADGTPLVF
LHADRELDAASVQNAFANGRDVEILSETESDTVLEVEAEDGLVTALSEYGGVIQELTVTD
GVADLVLELPDGRSARSAYDLLERRYDRVELDSYHETEEPTRTRKDIVTRLESSLTDRQL
MALRKAYYANYFEWPRDISGEELAASMDISRSTYHQHLRTAQRKLLDELLE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccggcaggacctcgctgcggcgacgctcgagacgctcccgatcaccatcgcc
gtcatcgacgacgacggcgagatcaggctgacgaaccgatcctggcgcgagttcgctccc
gagagcgaggaccacctcggtgtcgactacgttgcgactgccgcgactgcggacgacgaa
cacgccactcgtgcggttgcagggatcgagcgcgtgctcgacggcgaccaggagtccttc
gagatggagtacccctgtcactcaccgacggaaaagcgctggttcatgatgcgggccagc
cggtttcgcgacggcgacgagcgactggtgtcgatcgtccacgtcgagatcaccgagcgg
aaactcgccgagatcgccgccgaagagaacgcccaacaggtccgcgacgaacggcaggcg
ctcgaacacgtcctcgagcgcgtcgacgggctcgtccgtgacgtcaccgacgccgccgtc
ggtgcggagacgcggggagagatcgaacgcgaagtctgtgcgcggcttaccgaaaccgat
ccctacgcgctcgcgtggatcggccgggccgacgtcacgaaccgacggctgtccccccag
gagtgggccagcgagggggacgtttccctcgaggacgacgaactcgtcatcgggaccgac
gaacgccatcccgcgattcgggcgttcgaggacggcgacccacacgttatccaggatctc
gatgcgttcgacgatgccgaccgatggtggccagcggaggccggcgaacacgtccgatcg
atcatcgccttgccactgacgtacggtgagatcacctacggcgtcctcgtcgtgttcgcc
gccgatcccgaggccttcgacgaacgggaacgcttcgttctcgagtcgctggcggagacg
atcgcgaccgcgatgaacgcactcgaagtcaggcggatgctcacgaccgagaccgtcgtc
tccatggcggtttccctcgaggacccgtcgttgttcgtcacggcgttgtcgactgccgtc
gacgccacgatcacctaccgcggcgtgacctacgatgcggacgggacgccgctcgtcttc
ctccatgccgatcgcgaactcgacgctgccagcgtgcagaacgcgttcgcgaacggacgc
gacgtagaaatcctctccgagaccgagagcgacaccgtcctcgaggtcgaggccgaagac
ggactcgtgacggcgctgagcgagtacggtggggtgatccaggagctgacagtcaccgac
ggcgtcgccgatctcgtcctcgaacttcccgacggacggtccgcacggtcggcgtacgac
ctgctcgagcgccgatacgaccgcgtcgaactcgatagttatcacgaaacggaagaaccc
acccggacccggaaggacatcgtgacgcgactcgagtcgtcgctgaccgaccgacagctc
atggcgcttcgaaaggcctactacgcgaactacttcgagtggccccgagacatctccggc
gaggagttggccgcgtcgatggacatttcccggtcgacgtaccaccagcatctgcggact
gcccagcggaaactcctcgacgaactcctcgagtga
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