Natrinema longum: J0X27_14210
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Entry
J0X27_14210 CDS
T07116
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hlo
Natrinema longum
Pathway
hlo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
J0X27_14210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlo03019
]
J0X27_14210
03009 Ribosome biogenesis [BR:
hlo03009
]
J0X27_14210
04131 Membrane trafficking [BR:
hlo04131
]
J0X27_14210
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hlo04147
]
J0X27_14210
Messenger RNA biogenesis [BR:
hlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
J0X27_14210
Ribosome biogenesis [BR:
hlo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
J0X27_14210
Membrane trafficking [BR:
hlo04131
]
SNARE
SNARE associated proteins
Others
J0X27_14210
Autophagy
Aggrephagy
Other aggrephagy associated proteins
J0X27_14210
Exosome [BR:
hlo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
J0X27_14210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
CDC48_2
RuvB_N
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
IstB_IS21
AAA_28
Mg_chelatase
AAA_7
AAA_18
AAA_17
AAA_lid_PRS2_C
ABC_tran
AAA_3
Sigma54_activat
ATPase
AAA_24
NB-ARC
Parvo_NS1
DUF815
AAA_30
TsaE
SLFN-g3_helicase
AAA_11
Vps4_C
PhoH
NACHT
IPT
DUF6985
Arch_fla_DE
Motif
Other DBs
NCBI-ProteinID:
QSW84591
UniProt:
A0A8A2U7B4
LinkDB
All DBs
Position
2877876..2880104
Genome browser
AA seq
742 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKAEKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVGRDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVVLVTEDTDVELREEPISGFE
KTGGGITYEDIGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDET
GREEILQIHTRGMPLSDDVSLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKREDFRGALNEVEPSAMREVLVELPKISWEDVGGLQDAKDQVQESVEW
PLSTPERFERLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDALAPGRGGEVGSNVSERVVNQLLTELDGLEEMGNV
MVIGATNRPDMIDPALLRSGRFDRLVMIGEPDVDGRERILEIHTEDTPLAADVTLREIAE
ITDGYVGSDLESIAREAAIEALREDEDADIVEMRHFRQAMENVRPTITDDILDYYEQIEE
EFQGGTSGPDPTGRRGSRIGFQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtccaattggaggttgcgaaggcgtacccgaacgactcgggtcgtggtatc
gcccgactcgacccggacacgctgttgcatctgaagctcagtccgggcgacatcatcgag
atcgagggtgcggatacgactgcggcgaaggtctggcgtgcggatcggcaagactggaac
acggataccgtccgtatcgacggcttcacccgtcagaacgccgacgtcggtatcggcgag
cgggtaacgatccggaaggccgaagcgacgaaagccgagaagttggtgctcgcaccgccc
gaggaggcgtcggtccagtttgggtccgacgctgcgggcatggtgaaacgccagatcctc
aagcgcccggtcgtcggtcgcgacatcgtcccggtgatgtcctcgacgaatcatccgttc
atgcggtcgccggggcaagcgatcccgctgatcgccgtcgagaccgaacccgaaggcgtc
gtcctcgtcaccgaagacaccgacgtcgaactccgggaggagccgatctcgggcttcgag
aagaccggcggcgggatcacctacgaggacatcggcggcctgcaaggcgagatccagcgg
gtccgggagatggtcgaactcccgatgaagcacccgcagatcttcaagaaactcggtatc
gagccgccacagggcgtcctcctgcatggcccgccgggcaccgggaagaccttgctcgcc
aaggccgtcgccaacgagacctccgccagtttcttctctatcgccggtccggagatcatc
tcgaagtactacggcgaatccgaacaacaactcagggagatcttcgaggacgcgaccgag
gagtcgccgtcgatcatcttcatcgacgaactcgactccatcgccccgaaacgcgaagac
gtcaccggcgaggtcgagcgccgggtcgtcgcccagctgttgacgatgatggacggcctc
gagtcccgtggccaggtcatcgtcatcgcggcgaccaaccgggtcgactcggtcgaccca
gcactgcgccgacccggccgcttcgaccgcgagatcgagatcggcgtccccgacgagacg
ggccgcgaggagatcctgcagatccacacccgcgggatgcccctctccgacgacgtcagt
ctcgggcatctggccgacgagacccacggcttcgtcggtgccgacatcgagagcctgacc
aaagaggctgcgatgaaggcgctccggcgctacctccccgagatcgatctcgacgaggag
gacatcccgccgagcctgatcgaccggatgatcgtcaagcgcgaggacttccggggcgcg
ttgaacgaggtcgaaccctccgcgatgcgggaagtcctggtcgaactcccgaagatctcc
tgggaggacgtcggcggcctccaggacgccaaggatcaggtccaggagtccgtcgagtgg
cccctctcgacgcccgaacggttcgagcggctggggatcgatccgccggccggcgtcttg
ctgtacggcccacccggcacggggaagacgctcatggcgaaagccgtcgccaacgagacc
aacgcgaacttcatctccgtgcgtgggccgcaactcctctcgaagtgggtcggcgaatcg
gagaaggccatccgacagaccttccgcaaggcccgccaggtttccccgacggtcatcttc
ttcgacgaactcgacgcgctcgcgccgggtcgaggcggtgaagtcggctcgaacgtctcc
gaacgcgtcgtcaaccagctgctgaccgaactcgacgggttagaggagatgggcaacgtc
atggtcatcggcgcgaccaaccggccggacatgatcgaccccgcactgcttcgctcgggg
cggttcgaccggctggtcatgatcggcgaacccgacgtcgacggtcgcgaacgcatcctc
gagatccacaccgaggacacgccactggccgccgacgtcaccctgcgcgagatcgccgag
atcacggacggttacgtcggcagcgacctcgagtcgatcgcccgcgaggcggccatcgag
gctctccgtgaggacgaggacgcggacatcgtcgagatgcgccacttccgacaggccatg
gagaacgtccggccgacgatcaccgacgacatcctcgactactacgagcagatcgaagag
gagttccagggcggcacgagcggccccgatccgacggggcgtcgcggcagccggatcggc
ttccaataa
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