Natrinema longum: J0X27_14300
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Entry
J0X27_14300 CDS
T07116
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hlo
Natrinema longum
Pathway
hlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J0X27_14300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlo03021
]
J0X27_14300
Transcription machinery [BR:
hlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
J0X27_14300
Prokaryotic type
Archaeal type
TFB
J0X27_14300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Zn_ribbon_3
Auto_anti-p27
Zn_ribbon_Nudix
DZR
DNA_ligase_ZBD
Sigma70_r4
Zn_ribbon_RPB9
DZR_2
Zn_ribbon_tTFIIB
A2L_zn_ribbon
DUF5795
Trm112p
Motif
Other DBs
NCBI-ProteinID:
QSW84608
UniProt:
A0A8A2U9M0
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All DBs
Position
2906224..2907210
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AA seq
328 aa
AA seq
DB search
MTDTSIRTYTNERETETETEDETTSVTDEQEHCPECGGRLISDDEHAETVCTDCGLVVEE
DEIDRGPEWRAFDAAEKDEKSRVGAPTTNMMHDQGLSTNIGWQDKDAYGRSLSSRQRQKM
QRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALEEDLLPGR
SIEGVATASLYAAARQAGTPRSLDEISAVSRVEKMELTRTYRYIIRELGLEVKPADPEHY
VPRFVSDLDLSDETERMARDLLESARQEGVHSGKSPVGLAAAAVYAAALLTNEKVTQNEV
SDVASISEVTIRNRYKELLEASDTAAPA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacagatacgagcatccgaacctacacgaacgaacgagagaccgagacggaaaccgaa
gacgaaacgacgtcggtgaccgacgagcaagagcactgtccggaatgtggcggccgactg
atctccgacgacgaacacgccgaaacggtctgtacggactgtggactcgtcgtcgaggaa
gacgagatcgatcgtggccccgaatggcgagcgttcgacgccgccgaaaaggacgaaaag
tcccgcgtcggtgcgccgacgacgaacatgatgcacgaccaggggctctcgacgaacatc
ggctggcaggacaaggacgcctacggccgctcgctctcgagccgccagcgccagaagatg
cagcgcctgcgcacctggaacgagcgattccgcactcgcgactccaaggaacgcaacctg
aagcaggcactcggcgagatcgaccggatggcctccgcgctcgggctccccgagaacgtc
cgcgagaccgcgtcggtcatctaccgtcgcgcactcgaggaggatctgctgccaggccgt
tcgatcgaaggcgtcgcgaccgcgtcgctgtatgccgccgcccgccaggccgggaccccg
cgtagcctcgacgagatctcggccgtctcccgcgtcgagaagatggagttgacccgtacg
taccgctacatcatccgggaactcggcctcgaagtcaagccggcagaccccgaacactac
gttccccggttcgtcagcgacctcgatctctccgacgagaccgagcggatggcccgcgac
ctgctcgagtcggcccgtcaggagggcgtccacagcggcaagtcgccggtcggcctcgct
gccgcggcagtgtacgccgccgcgctcttgaccaacgagaaagtcacccaaaacgaggtc
agcgacgtcgcgagcatctccgaagtcaccatccgaaaccggtacaaggaactgctcgag
gcatcggacacggctgcacccgcgtaa
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