Natrinema longum: J0X27_14875
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Entry
J0X27_14875 CDS
T07116
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hlo
Natrinema longum
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hlo03032
]
J0X27_14875 (gyrB)
03400 DNA repair and recombination proteins [BR:
hlo03400
]
J0X27_14875 (gyrB)
Enzymes [BR:
hlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J0X27_14875 (gyrB)
DNA replication proteins [BR:
hlo03032
]
Prokaryotic type
DNA Topoisomerases
J0X27_14875 (gyrB)
DNA repair and recombination proteins [BR:
hlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J0X27_14875 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QSW84718
UniProt:
A0A8A2U9X5
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All DBs
Position
3016237..3018168
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AA seq
643 aa
AA seq
DB search
MSQESEYGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGHCDDI
TVTIHEDESVSVADDGRGIPVDTHEEYDRPALEVILTVLHAGGKFDNKSYQVSGGLHGVG
VSVVNALSERLEAEVKRDGGVFRHAFEGGEPIGDMERVREMRPDEETGSQIRFWPDTGIF
ETGDVSFSTLSNRLRELAFLNSGVRITLRDERADDDEGEAVTETYEYDGGIREFVDYLNE
TRSAMHEDVIYFEDEAQNIQIEVAMQATQELQGSIHAFANNINTREGGTHLTGFKTALTR
CVNDYANDNDLLSDLDDNLTGEDIREGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVES
AMHEGLGTYFEEHPDTAEAIVNKAVEAAKARMAAQKAEELTRRKSALESTSLPGKLADCQ
TKDPEEAELFIAEGDSAGGSAKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMI
TAIGAGIGDEFDVEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQP
PLYRIRYRGETYDAMTDAERDRIVEEKCDGNPSQVQRFKGLGEMNPEQLWETTMNPDNRI
LKQITIEDAAAADKMFSVLMGDAVEPRKQFIKDHAPEAEWIDI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggaaagcgagtacggagccgggcagatccaggtcctcgagggcctggaagcc
gtccgaaagcgaccggcgatgtacatcggctctaccgattctcgaggcctccaccatctg
gtctacgaagtggtggacaactcgatcgacgaggcactggccggccactgcgacgacatc
accgtcaccatccacgaggacgagtcggtgagcgtcgctgacgacggccgtggtatcccc
gtcgacacacacgaggagtacgaccgccctgcactcgaggtcattctgaccgtcctccac
gccggcggcaagttcgacaacaagtcctaccaggtctccggcggcctccacggcgtcggg
gtgagcgtcgtcaacgccctctccgagcgcctcgaggccgaggtcaaacgcgacggcggc
gtcttccgccacgcgttcgagggtggcgaacccatcggcgacatggaacgcgttcgcgag
atgcggcccgacgaggagacggggagccaaatccggttctggcccgatacgggtatcttc
gagacgggcgacgtctcgttctcgacgctgtcgaaccggcttcgggaactggccttcctc
aactcgggcgtccgcatcacgctccgcgacgagcgcgcggacgacgacgagggtgaggcc
gttaccgagacctacgagtacgacggtggcatccgcgagttcgtcgactacctcaacgag
acgcgctcggcgatgcacgaggacgtcatctacttcgaggacgaagcacagaacatccag
atcgaagtcgcgatgcaggccacccaggaactgcagggttcgatccacgccttcgcgaac
aacatcaacacacgcgagggggggacccacctcaccgggttcaagaccgcgctgacgcgg
tgtgtcaacgactacgccaacgacaacgatctcctctcggacctcgacgacaacctcacg
ggcgaggacatccgcgaggggctgaccgcagtcatctcgatcaaacaccccgatccccag
ttcgagggccagacgaagacgaaactcggcaactcggaagtacgaggcatcgtcgagagc
gccatgcacgaggggcttggcacctacttcgaggaacaccccgacaccgccgaggcgatc
gtcaacaaagcggtcgaagccgcgaaggcacgcatggccgcccagaaggccgaggagctg
acccgacggaagtccgccctcgagtccacctcgctgcccgggaaactggctgactgccag
accaaagaccccgaggaggccgaactgttcatcgcggagggtgactccgcgggagggagc
gcgaaacaggcccgaaaccccgacttccaggccatcctgccgatcaaggggaagattctg
aacgtcgagaaacaccggctcgatcgcatcctcgagaacgacgagatccggaacatgatc
accgcgatcggcgcggggatcggcgacgagttcgacgtcgaggacgtccgctacaagaag
atcatcatggcgacggacgccgacgtcgacggggcacacatccggacgctcctgttgacg
ttcttctaccggcacatgcgcccgctgctcgagggcggttacgtctacgcgacccagccg
ccgctgtaccgcatccgctatcgcggcgagacctacgacgcgatgaccgacgccgaacgc
gatcggatcgtcgaagagaagtgcgacggcaatccctcgcaggtccagcggttcaaggga
ctcggcgagatgaaccccgaacagctctgggagacgacgatgaaccccgacaaccgcatc
ctcaaacagatcacgatcgaggacgcggccgcggcggacaagatgttctccgtcctgatg
ggcgacgccgtcgaaccccgcaagcagttcatcaaggaccacgcgcccgaggccgagtgg
atcgacatctaa
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