Natrinema longum: J0X27_17285
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Entry
J0X27_17285 CDS
T07116
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hlo
Natrinema longum
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hlo03036
]
J0X27_17285 (smc)
Chromosome and associated proteins [BR:
hlo03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
J0X27_17285 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
ATG16
EzrA
Crescentin
DUF1664
AAA_15
AAA_29
AAA_13
CENP-F_leu_zip
Tropomyosin
DUF4407
DUF3584
Fez1
MscS_porin
DUF724
APG6_N
ZapB
GAS
TPR_MLP1_2
Exonuc_VII_L
ATG17_like
Laminin_II
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
QSW85172
UniProt:
A0A8A2U9R7
LinkDB
All DBs
Position
complement(3477407..3480979)
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AA seq
1190 aa
AA seq
DB search
MYIKSIVLDDFKSFGRKTKIPFYEDFTVVTGPNGSGKSNIIDAVLFALGLARTRGIRAEK
LTDLIYNPGHEGGDTSSGPREATVEVVLDNSEGTLERSQVVNAAGSEDVGDVDEIRIRRR
VKETEDNYYSYYYLNDRSVNLSDIQDLLAQAGITPEGYNVVMQGDVTEIINMTPHARREI
IDEIAGVAEFDAKKEDAFEELETVQERIDEAELRIEEKRDRLEQLADERREAMRYRRLRR
EKDEYEGYKKASELEEKREELESAEAEVDDLEAELRELQRELDEREGAVVRLQEDLEDLN
AEIERKGEDEQLRIKSEIEEVKGDISRLEDKIEASEEAIEDAESERREAFVEIDRKQETI
DDLDDEIREHKLEKAQVKSEIQEREADRDDLEAEIEAVDTEFDELKAELAERKDDLEAAK
TEKNDLQREQDRLLDDARRRSNAISEKEATIEEKRETIPEIESQRSDLERELEKAERNRQ
NIAEVVDDLKAQKRRLQSDVDDLDDEIQAKQQEYAELEANAGESGDSSFGRAVTTILNSG
IDGVHGAVAQLGTVAGEYAVACETAAGGRLANVVVDDDVIGQQCIEHLKSRNAGRATFLP
LTDMSQRRLPSAPSDPGIVDFAYNLVDFDREYAGVFSYVLGDTLVVEDIETARSYMGDYR
MVTLDGDLVEKSGAMTGGSGGGSRYSFTGGGEGQLERVAKRITELQEERESLREEVRSVE
ERLDDARDRKSDAADEVRSIESELEGIAEKREALEAEIEDLETDLEELREERDSVDERMN
EIAAEIDAKTEAVEELEAEIEDLETELADSKIPELTDRIETLEAEIDDREERIQELDNDL
NELNLEKEYAEDAIEDLHDDIEAAQNRTAEHEDRIEEYEAEIETKREELAAKREAVEELE
AELTELKDERSDLKEELSDARTARDQQQDRVNTVESKLEDASERANSLEWEIESLESEVG
DYDPEDVPDHETVREMIDLLGADMEAMEPVNMLAIDEYDEVRSDLEELEEGRETLVEEAD
GIRDRIEQYETQKKRTFMDAYDAIASHFTEIFEKLSEGTGTLHLENEADPFDGGLTMKAQ
PGDKPIQRLDAMSGGEKSLTALAFIFAIQRHNPAPFYALDEIDAFLDAVNAERVGEMVEE
LAGDAQFVVVSHRSAMLDRSERAIGVTMQQDNVSAVTGIDLSSGEVPADD
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagtcgatcgttctcgacgatttcaagagcttcggtagaaagacgaagata
ccgttctacgaggatttcaccgtcgtcacgggcccgaacggctccggcaaatcgaacatc
atcgacgccgtcctcttcgcgctcggactggcccggacccgcgggattcgggccgagaaa
ctgaccgatctcatctacaaccccggtcacgagggcggcgacacctccagtggcccccgc
gaggcgaccgtcgaggtcgttctcgacaactccgagggcaccctcgagcgatcacaggtc
gtcaacgccgccggcagcgaggacgtcggcgacgtcgacgagatccgcatccgccgtcgg
gtcaaggagaccgaggacaactactactcctactactacctgaacgaccgctcggtcaac
ctctcggacatccaggacctgctcgcacaggcggggatcacgccggaaggatacaacgtc
gtcatgcagggcgacgtgaccgagatcatcaacatgacgccccacgcccgccgggagatc
atcgacgagatcgcgggggtcgcggagttcgacgccaagaaggaagacgccttcgaggaa
ctcgagaccgttcaagagcggatcgacgaggccgaactccgcatcgaggagaaacgcgac
cgcctcgagcaactcgccgacgagcgccgggaggcaatgcgctaccgccggctccgccgc
gagaaagacgaatacgagggctacaagaaggccagcgaactcgaggagaaacgcgaggaa
ctcgagtccgccgaggccgaggtcgacgatctcgaggccgaactccgggaactccagcgg
gaactcgacgaacgcgaaggggcggtcgtccgcctccaggaggacctggaggacttgaac
gccgagatcgagcgcaagggcgaggacgaacagctccggatcaaaagcgagatcgaggag
gtcaaaggcgacatctcgcggctcgaggacaagatcgaagccagcgaggaggcgatcgag
gacgccgagtccgagcgacgcgaggcgttcgtcgagatcgatcgcaagcaagagacgatc
gacgatctcgacgacgagattcgcgaacacaaactcgagaaggcacaggtaaaaagcgag
atccaggaacgcgaggccgaccgcgacgacctcgaggccgaaatcgaggccgtcgacacc
gagttcgacgaactcaaggccgaactcgccgagcgaaaggacgatctcgaggcggccaag
accgagaaaaacgacctccagcgcgagcaagaccgcctgctcgacgacgctcgccgacgc
tcgaacgcgatcagcgagaaagaggcgacgatcgaagagaaacgcgaaacgattccggag
atcgagagccagcgaagcgacctcgagcgggaactcgagaaggccgaacggaatcgccag
aacatcgcggaggtcgtcgacgacctgaaagcccagaaacgcaggctccagtcggacgtc
gacgatctcgacgacgagatccaggccaaacaacaggagtacgccgaactcgaggccaac
gccggcgagagcggcgactcctcgttcggtcgtgcggtgacgacgatcctcaactcggga
atcgacggcgttcacggcgcggtcgcacagctggggaccgtcgccggcgagtacgcggtc
gcctgtgagaccgccgcggggggtcggctggcgaacgtggtcgtcgacgacgacgttatc
ggccagcagtgcatcgagcatctcaagtcccgaaacgcgggtcgagcgaccttcctgccg
ctgacggacatgagccagcgccggctgccatcggcccccagcgatccggggatcgtcgac
ttcgcgtacaacctcgtcgacttcgatcgggagtacgccggcgttttctcctacgtcctc
ggggacacgctggtcgtcgaggacatcgagaccgcccgctcgtacatgggcgactaccgg
atggtcaccctcgacggcgacttagtcgagaagagcggcgcgatgaccggcggctccggc
ggcggttcgcgctactcctttaccggcggcggcgaggggcaactcgagcgcgtcgccaaa
cggatcacggagctccaggaggaacgcgaatcgctgcgcgaggaagtccgcagcgtcgag
gagcgactcgacgacgcccgcgaccgcaagagcgacgcggccgacgaagtccgctcgatc
gagtccgaactcgaggggatagccgagaaacgcgaggccctcgaggcggagatcgaggac
ctcgagaccgatctcgaggagctccgcgaggaacgcgactccgtcgacgagcggatgaac
gagattgccgcggagatcgacgccaagaccgaagcggtcgaggaactcgaggctgagatc
gaggacctcgagaccgaactcgccgactcgaagatccccgaactgaccgatcggatcgag
acgctcgaggccgagatcgacgaccgcgaagagcggattcaggaactcgacaacgacctc
aacgaactgaacctcgagaaggagtacgccgaggacgccatcgaggacctccacgacgac
atcgaggcggcccagaaccgcacggccgaacacgaggatcggatcgaagagtacgaggcg
gagatcgagacgaagcgcgaggaactggcggcaaagcgcgaggccgtcgaggaactggaa
gcggagttgacggagctgaaagacgaacggagcgacctcaaagaggaactctccgacgcc
aggacggcacgcgatcagcaacaagaccgggtcaacaccgtcgagagcaaactcgaggac
gcgagcgagcgcgccaacagcctcgagtgggagatcgaatcgctggagtcggaagtcggc
gactacgatcccgaagacgtgcccgaccacgagaccgtccgcgagatgatcgaccttctg
ggggccgacatggaggcgatggagccggtgaacatgctcgcgatcgacgagtacgacgag
gtccgaagcgacctcgaggaactcgaggagggacgggagacgttagtcgaggaggccgac
ggcatccgcgatcggatcgagcaatacgagacccagaagaagcggacgttcatggacgcc
tacgatgcgatcgcgtcccacttcacggaaatcttcgagaagctctccgaagggacgggg
acgctccacctcgagaacgaggccgatccgttcgacggcggactgacgatgaaggctcag
ccgggcgacaagccgatccagcggctggacgcgatgtccggcggcgagaagtcgctgacc
gcgctggctttcatcttcgccatccagcggcacaacccggctcccttctacgcgctcgac
gagatcgacgccttcctcgacgccgtcaacgccgagcgggtcggcgagatggtcgaggaa
ctcgccggcgacgctcagttcgtcgtcgtctcccaccgctcggccatgctcgatcgctcc
gagcgggcgatcggcgtgacgatgcaacaggacaacgtgagtgcggtgaccggcatcgat
ctgagtagtggggaggtgcctgctgatgactag
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