Humulus lupulus (common hop): 133777423
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Entry
133777423 CDS
T11341
Name
(RefSeq) protein SCARECROW-like
KO
K27742
protein SCARECROW
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hlp03000
]
133777423
Transcription factors [BR:
hlp03000
]
Eukaryotic type
Other transcription factors
GRAS
133777423
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
GRAS
TPP_enzyme_M_2
Motif
Other DBs
NCBI-GeneID:
133777423
NCBI-ProteinID:
XP_062072975
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Position
5:complement(68044657..68048853)
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AA seq
749 aa
AA seq
DB search
MVRKRMASEMEVQTATASDYLRLSRRGVPMAIGFSFPVTGDSNNNSNININNSNSYDIIP
PNPNNTTPTSARPSSVSTTGMNPNYSTLIPSSTSLTNLTSGGVSGVLSTTTTTCSTAPNL
TQIDPLPYQHLHHNPNHNQIRSLPQTHHQYQSPAVCGFSGLPLFPPESTSREINTTNICI
NNANNNSIHNNLSPSPPAAAAGSGCRVISPSNTTSSTTASSMDDNNHNNHNSASATAWID
GIIKDLIHSSTNVSIPQLIHNVREIIYPCNPNLATLLEYRLRSCLASDTPNVAVFSPPLE
SSPTAMNDQYLHWGGAVLPPPPLPQSTATNTADVIQQQPENPSPAEEPVPAPSPAVLLRE
KKEELRQQKRDEEGLHLLTLLLQCAEAVSADNFDDANKILLEISELSTPFGTSAQRVAAY
FSEAMSARLVSSCLGIYAAMPSAGVPQSHSQRMASAFQVFNGISPFVKFSHFTANQAIQE
AFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGNSMDSLEATGKRLSDF
ADKLGLPFEFFPVADKVGNLDPERLNVSKREAVAVHWLQHSLYDVTGSDTNTLWLLQRLA
PKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRN
VLAVGGPSRSRDVKFHNWRDKLQQSGFRGISLAGNAATQATLLLGMFPSDGYTLVEDNGT
LKLGWKDLCLLTASAWRPPYHATPTTLHY
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaaagaggatggcttccgagatggaagtccagaccgccaccgcctccgattat
ctcaggctctctcggcgtggtgttccgatggctatcggtttctcctttccggtcactggt
gatagtaataataatagtaatataaatattaataatagtaacagttatgatattattcct
cctaatccaaataatactactccgacctcggccagaccatcgtcagtgagtacgaccggg
atgaaccccaactactccactttgataccatcttctacaagtttgacaaatctgacgtca
ggtggggtttctggggttttatctactactactactacttgttctacagctcccaacttg
acccaaatcgaccctctcccttatcaacatcttcatcataatcccaatcataatcaaatc
aggtcactcccccagacccaccaccagtaccagtccccagccgtttgtgggttttcgggt
ctgcctttgttcccacccgaaagtactagccgtgaaataaacactaccaatatttgtatc
aataacgctaacaataatagcattcacaacaatcttagtccaagtcctcctgctgcagca
gctggttcaggctgtagggttattagcccctccaacaccacgagtagcactacagcgtca
tccatggatgataacaaccacaacaatcacaacagtgcctcggctacggcctggatcgat
ggcatcattaaggacctcatccacagctccaccaacgtctccatccctcaactcatccac
aacgtcagggagatcatctacccttgtaacccaaacctcgccaccctcctcgagtaccgc
ctccgctcctgcctagcatcagacactccaaacgttgccgttttctctcctccgctggaa
tcttcacccactgccatgaacgaccagtacttgcactggggaggagccgtgcttccccct
ccgcctcttcctcagtcaactgcgaccaatacggccgacgtcatacaacaacagccggag
aacccatctcccgcggaggaacctgtaccggcaccatctccggcggtactactccgagag
aagaaggaagagcttcggcagcagaagcgggacgaagaggggttacatctgttgaccctt
ttgctccaatgcgctgaggcagtatcggcggacaacttcgacgatgcgaataagatcctt
ctcgagatttcagagttgtcgacgccgttcgggacgtcggcacaacgcgtcgccgcgtac
ttctcggaggcgatgtcggctcggctagtgagttcgtgcctggggatatacgcggctatg
ccgtcggcgggggtgccgcaaagccatagccagaggatggcgtcggcgttccaggtgttc
aatgggataagtccgttcgtgaagttctctcacttcacagccaatcaggctatccaggag
gcgtttgagagggaggaaagggttcacatcatcgatcttgacatcatgcagggtttgcaa
tggcccggactttttcacatattggcgtctagacccggtggccccccatacgtgagactg
actggcctaggcaactctatggactcactcgaggccaccggaaagcgcttgtccgatttc
gccgataagttgggtcttccctttgagttctttccggtagccgacaaggtcgggaatttg
gaccctgagaggctcaatgtcagcaagagggaggccgttgctgtccattggttgcagcat
tcactttacgatgtcactggttcggataccaacacgttgtggcttttgcagagattggcg
ccaaaagtggtgacggtggtggagcaggacctgagccacgcaggatcgtttttaggaagg
ttcgtggaagcgattcactactactcagcgctgttcgactcgctgggagcgagctacggc
gaggagagcgaggagaggcacgtggttgagcagcagctgctgtcgagggagataaggaac
gtgttggccgtgggagggccgtcgagaagcagggacgtcaagttccacaactggcgggac
aagcttcagcagtcaggctttcgcggaatctccctggcaggcaatgccgccacccaggcc
actctccttctcggcatgttcccttcagatggctacaccttggtggaggacaatggaacc
cttaagcttggctggaaggacctttgcttgcttacagcttcggcttggaggccaccctac
catgccacgcccacaactcttcactattag
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