Humulus lupulus (common hop): 133778459
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Entry
133778459 CDS
T11341
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133778459
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hlp01009
]
133778459
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hlp03041
]
133778459
Protein phosphatases and associated proteins [BR:
hlp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133778459
Spliceosome [BR:
hlp03041
]
Common components
Common spliceosomal components
SR proteins
133778459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
133778459
NCBI-ProteinID:
XP_062074380
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All DBs
Position
5:complement(236212859..236216213)
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AA seq
193 aa
AA seq
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MPYSRQRRSPSPQSPGRGSRRSRSLSLTRSRRSRSRSRDLEDVVNPGNNLYVTGLSTRVT
TGDLEKFFGKEGKVLECHLVTDPRTRESRGFGFVTMETLEDAERCVKHLNRAVLEGRLIT
VEKAKRKRGRTPTPGRYQGLRDKRGGHGNRHSRSYSPRRWPERDPYSRDQRRRSRSPYDR
RRREQSPPAGYRR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgccatattcaagacaaagaaggtctccttcaccacagtcacctggtagaggaagccgc
cggtcaagatcattgtccttgacaaggtcaaggagaagccgttcaaggagtcgcgatctt
gaagatgtagtcaaccctgggaataacttgtatgtgacaggcttatctacaagagttacc
actggtgatcttgagaagttttttggaaaagaaggaaaggttttggagtgccacctggtc
acagatcctcgcaccagggaatctcgtggatttgggtttgtcactatggaaactcttgaa
gatgcagagcgctgtgttaaacatttaaatcgtgcagttcttgaaggtcgattaatcact
gtagaaaaggctaaacggaagcgaggaaggacaccaactccaggaaggtatcaaggtttg
cgagacaagcgaggtggccatggtaatagacattctcgtagctactcaccacgtcgatgg
ccagaaagagacccctattcaagggatcaacggagaagatcaagatctccatacgataga
aggcgcagggagcagtccccaccagctggttatcgtagataa
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