Humulus lupulus (common hop): 133781441
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Entry
133781441 CDS
T11341
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133781441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133781441
03110 Chaperones and folding catalysts [BR:
hlp03110
]
133781441
03029 Mitochondrial biogenesis [BR:
hlp03029
]
133781441
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hlp04147
]
133781441
Enzymes [BR:
hlp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
133781441
Messenger RNA biogenesis [BR:
hlp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
133781441
Chaperones and folding catalysts [BR:
hlp03110
]
Heat shock proteins
HSP60 / Chaperonin
133781441
Mitochondrial biogenesis [BR:
hlp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
133781441
Exosome [BR:
hlp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133781441
Exosomal proteins of other body fluids (saliva and urine)
133781441
Exosomal proteins of breast cancer cells
133781441
Exosomal proteins of colorectal cancer cells
133781441
Exosomal proteins of bladder cancer cells
133781441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
133781441
NCBI-ProteinID:
XP_062076404
LinkDB
All DBs
Position
6:3796357..3800519
Genome browser
AA seq
604 aa
AA seq
DB search
MASTFAAMSSAGSLAAPSGRVLDNKFQKLSSSSSISSCSFARRQNVVRRTPSPRISAMAK
ELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVEL
EDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEK
TTKALVAELKLMSKEVEDSELADVAAVSAGNNNEVGSMIAEAMSKVGRKGVVTLEEGKSA
ENSLYVVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKITNARDLINVLEEAIRG
GYPIVIISEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRE
EVGLSLDKVGKEVLGHASKVVLTKDTTTIVGDGSTQDAVNKRVAQIKNLIEAAEQDYERE
KLSERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLA
SKVDAIRDSLENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLASDNFKYGYNA
ATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNS
GYGY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacgttcgcagccatgtcatctgctggctccttggctgccccgagtggtcga
gtgttggataacaagttccagaagctttcctcttcttcctccatttcttcatgctctttt
gctagaaggcagaatgtcgttagaagaaccccttctccaaggatttctgccatggccaaa
gagttgcatttcaacaaggatggttcagccattaagaaattacaaacgggtgttaacaag
ctcgcggatcttgttggtgttactcttggtcctaaaggaagaaatgttgtcctagaaagc
aagtatggctcccccaaaattgttaacgatggtgtcaccgtcgccaaagaggttgagttg
gaggaccctgtggagaacattggagctaaactagtgaggcaggcagcagctaagactaat
gacttggctggtgatggaacaaccacatcggttgttcttgcccaaggtcttattgctgaa
ggagtcaaggtggtagctgctggagcaaaccctgttttgatcacaagaggtattgagaag
accacaaaggctctggtggctgaactcaagttaatgtctaaagaggttgaggacagtgaa
ctcgcagatgtggctgcagttagtgcgggaaacaacaatgaggtcggaagcatgattgcc
gaagccatgagtaaggttggcaggaagggtgtggtgacccttgaggaagggaaaagtgct
gaaaacagtctctatgttgttgaaggaatgcaatttgaccgaggttacatttcgccctac
ttcgttactgacagtgaaaagatgtcagtagaatatgaaaactgcaagttgcttcttgtt
gacaagaaaattactaatgcaagggatcttatcaatgttttggaggaagccatcaggggt
ggatacccaattgtgattatttcagaggacattgaacaagaagcattggctactcttgtt
gtgaacaagctcagaggggctttgaagattgctgcacttaaagctcctggtttcggagag
cgcaagagccaataccttgacgatattgccattttaaccggaggaactgtgatcagagaa
gaggtgggacttagcttagacaaagtaggcaaggaggtcttaggtcatgcttcaaaggtg
gtgcttactaaggacaccaccacaatcgtcggtgacggaagtacccaggacgcagttaac
aagcgggttgcacagattaagaatcttattgaggctgcagagcaggactatgaaagggag
aagctcagtgagagaattgcaaaattgtccggtggtgttgctgtgatacaggttggtgca
caaaccgaaacagagctcaaagaaaagaagttgagagttgaggatgcccttaatgcaaca
aaggcagctgttgaggaaggtattgtagtaggtggtggatgcaccttgttgagattggca
tcaaaggtggatgcaattagagacagccttgaaaatgatgaggaaaaggttggagccgat
attgtcaagagagctctcagctacccattgaaattaattgccaagaatgccggagttaac
ggtagcgtggtcagtgagaaggtgctcgccagtgacaatttcaaatacggatacaacgcg
gccactggaaagtacgaagatttaatggctgctggaattattgacccaaccaaggtggta
aggtgttgtttagaacatgcctcgtctgtggccaaaacatttttgatgtcagactgtgtg
gttgtggagataaaggagccagaaccagcaatgcctgctggcaaccccatggacaattca
ggttatggctactga
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