Humulus lupulus (common hop): 133781510
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Entry
133781510 CDS
T11341
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
hlp
Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlp03021
]
133781510
Transcription machinery [BR:
hlp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
133781510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
HpiC1-like
Motif
Other DBs
NCBI-GeneID:
133781510
NCBI-ProteinID:
XP_062076525
LinkDB
All DBs
Position
6:complement(5609196..5622840)
Genome browser
AA seq
1976 aa
AA seq
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MLTNVFKIGGLHQISWFQFLPHESDWISIPDKSLKGEQKDAATMLVLSSHLQLQKEGFLS
TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGHHSSVTESAQAAVSRLRVVKFGLWLAPGD
SEEVATALSQALRNCIERALYGLSYMRYGDVFSKFRPSQSEETFRRGQHTIEFIFAATEE
GIFVHAIISSKHIRALSSGDLERVSKQSSNNSSYKLPVVVSPHGIRGRLTGCCSDDLVKQ
LYLGSNKFKASSGLIGLPNHVSQGSGCQLGGQHCYVEVTLGCNRSEGDGQLNSNSNFNKN
TPQHHVADSSALGKADQKGAVDNISVYEKTFLYPPEAVLVPVLQKSFTRSSLKRFWLQNW
IGPSLAGSAFFVQCADNVDCLEGLNEINNKRSQHGYNSSSNSNNSSISSISSSSSDSDYK
MTIGTSELEADADSLTCGQSGLSSNDQMEMDFPKLGSKRPRPGMTESYGQMGAASNFPMQ
DSYKSDLGPGEVNNSVITGVANEQIGSYWDWDDDDRDVGTDILALLHEFGDFGDFFETDA
LPFGEPPGTAESQALMFSAPDCGDILSSPGGIMDVSDPLLSNDGFTSFDSFNPPQAANDE
VLSKNQGVINTFSSLNLVNQSVASSTISSEFDHIIKAEALMTFASEFGAVEAPSSELSSS
IFRSPYCPKSRKVESSSSSSNNYIYGATPPSSPCFDGTDEKTGTLVNPKTCNNLKQNSST
TVQSKNCYTLVVSVKDQHDRRSCNNSIVASDGVAALSSNVSSINATNSAQRKLHDSTFDS
DNLFLSKKTALATEVECLMFQASMCRIRHTLLSSSSSTSVGLSRLNSNTILNQHPSEPSM
MTDNLSSKYEVKKKESIPVRIAGDIDGRMLDGHLNAPVGVWRSVGVPRVSKPTNSPSMEV
SPSLPHNTFNEEGILSYGQRQPLQELLDGMTLLVQQATSFVDLALDAECGDGPYGLLALQ
EQWRKGFSCGPSMVHAGCGGTLASCHSLDIAGVELIDPLTADVYASSVVSLLQADIKSAL
KSAFDALDGPLSVTDWCKGRNQSGEAGNTGDGYSAESNLSESSSAAVSIGEPMSPSQTSS
GPSSLKDGVKMDETCQRRLNQENCSSEADPSVGSRLRPTLFVVPLPSILLGYQDDWLKTS
ASSLQLWEKAPFEPYALPKPITYCVVCPNIDPLTSEASDFFQQLATVYETCKLGTHLPQS
FGNQMDVDSGKFSNSGFVLLDCPQAMRIDSRNASLVGSISDYFLSLSNGWDLTSYLKSLS
KALKALKLGPCISTNAKEGSSTSCIVIYVVCPFPEPTAVLQTVVESAVALGSVVFQSDRE
RRSMLHSQVAKALSCSAAVDEASISNVLVLSGFSIPKLVLQIVTVDAIFRVTSPSLSELV
TLKEIAFTVYNKARRMSRGSSNDVVHSSSLSARPHSVLSQMTSHTPGMWKDCIGPRITGH
SLPREGEIDSSLRSGAWDNSWQTRGGSIACDPNRMGDYFLHDEIRYMFEPLFILAEAGSL
ENGYTPFASGSSASESSKSLLDDSSGSYMQSSSLVGSGDAASNSHIDGSDMDKNAPSLHC
CYGWSEDWRWLVCIWTDARGELLDSQIFPFGGISSRQDTKGLECLFVQVLQQGCHILQAC
SSDSGVVRPRDFVIARIGSFYELEYQEWQKAINSVGGSEVKKWPLQLRRSVSDGIPASSN
GTSLQQQEMSLIQERNLPSSPNPLYGSPHSKTSSFMKGGLGGQPAVRKHIMSGHTVIDNS
KGLLQWVQSITFVAISIDHSLHLVSQADSPSPGGTQAGLHSGSSGYLEGFTPVKSLGSTS
ASYILIPSPSMRFLSPTPLQLPTCLTAESPPLAHLLHSKGSAIPLSTGFVISKAVPSMRK
DSRHNLKEEWPSALSISLIDHYGGNSFNLEKITRGPIKQGRRSSSSDPKEFETDTHLILE
SVAAELQALSWMTVSPSYLERRTALPFHCDMVLRLRRLLHFADKELARHLEKSQTG
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atgttgactaatgttttcaaaattggaggtcttcatcaaatttcatggttccaatttctt
ccccatgaatcagattggatatctatacccgataaaagtttgaaaggggagcagaaagat
gctgctacgatgcttgtgctttcatcacatctgcagttgcagaaggaaggatttctcagc
acttggactaattcctttgttggaccctgggatccatctcagggtttgcacaatcctgat
gagaaaatcaagttgtggctttttcttcctggacatcattcatctgtcactgagtctgct
caagctgccgtatctcgactaagagttgttaaatttgggctttggttggccccgggagac
tctgaagaggttgccactgccctttcacaggctttaaggaattgcatagaaagagctctc
tatggactctcctatatgagatacggagatgtgttttcaaagttccgtccatctcaaagt
gaagaaacattcagaagagggcagcatacgattgaattcatatttgctgcaacggaagag
ggaatttttgtgcatgctataatatcttcaaagcatatccgcgctctttcaagtggtgac
ttagagagagtgtcgaagcaatcttctaataactctagttacaaacttccagtggttgtt
tctcctcatggaatacgtggcagacttactggatgttgttctgatgatctcgtaaaacag
ttatacttaggttccaacaagtttaaggcttcaagtggtttaattggtcttccaaatcat
gtttctcaaggatctggttgccaacttgggggacaacattgctatgttgaagtaaccctt
ggttgcaatagatcagaaggtgatgggcaattgaattcaaactcaaatttcaacaagaat
acaccccagcaccatgttgctgattcttctgctttgggaaaagctgatcaaaagggagct
gttgataacatatcagtttacgagaaaacatttctatatccaccggaggcagtgcttgtt
ccggtcttgcaaaaatcatttacaagatcctctcttaaaagattttggctgcagaattgg
ataggaccctcattagctggctcagctttttttgtgcaatgtgctgacaatgtagattgt
ttggaaggattgaatgaaatcaataataaacgctcacagcatggttataatagtagcagc
aacagtaataacagcagcattagtagcataagcagcagctccagtgatagtgattataag
atgaccattggcaccagtgaacttgaggctgatgccgattcattgacctgtggacaatct
ggtttatcatctaatgatcagatggagatggattttcccaaattgggttccaagcgtcca
cggccagggatgacagagtcatacggtcaaatgggcgctgcttcaaattttcccatgcaa
gattcatacaagtctgatcttggtcctggagaagtcaataattcagtgattacaggagtt
gcaaacgagcagattggatcttattgggattgggatgatgacgatagagatgtgggtaca
gatattctagctcttcttcatgagtttggagattttggcgacttcttcgaaactgatgcc
ttaccttttggagagccccccggaactgcagaatcacaggctcttatgttctctgcacca
gattgtggtgatatacttagcagtccaggtgggatcatggatgtttcagatccattgctt
tcaaatgacggttttacttcctttgacagctttaatccacctcaagcagctaatgacgag
gttctcagcaaaaatcaaggagtcataaataccttctcttcattgaatttagtaaatcaa
tctgtagcatcttctacaatttctagtgagtttgatcatattataaaagctgaggctctg
atgacatttgcctctgaatttggggcagtggaagctccgtcaagtgagttatcttcatcc
atcttcagaagcccatactgccccaaatctcggaaagtggagagttcaagctcaagctca
aacaattacatatatggtgcaacacctccgagttctccttgttttgatggaactgatgag
aaaactggcacactcgtgaatccaaaaacttgcaacaatttaaagcaaaattcaagtact
actgtccagtcaaagaactgttacactcttgtagtgagtgtgaaagaccaacacgataga
agatcttgtaacaacagcattgttgcatctgatggtgtggcagctttatcttcgaatgtc
agttccataaatgctactaactctgcccagaggaaacttcatgatagcacatttgattca
gataatctatttctctctaagaaaaccgcgcttgcaactgaagttgaatgccttatgttc
caagcttccatgtgtaggattcgacataccctattatcttcaagtagctctacatcagta
ggtttaagcaggttaaattcaaacactattttaaatcagcatcctagtgaaccaagtatg
atgacagacaatctatccagcaagtatgaggtgaagaagaaagaatctataccagttaga
atagctggtgatattgatggaagaatgctagatgggcatctcaatgctcctgttggtgtt
tggcgctctgttggtgttcctagggtatcaaaaccaacaaattcaccaagcatggaagtt
agcccatctttgcctcataataccttcaacgaggaaggtattctttcttatgggcaaaga
caaccacttcaagagcttctcgatggaatgacattacttgtccaacaagctacatccttc
gtcgatctggctcttgacgcggagtgtggtgatggaccttatggtttgcttgcactacaa
gaacagtggaggaagggattttcctgtgggccttccatggttcatgcaggttgtggggga
actttggcatcttgtcattccttggacattgctggagtggagttgattgatccacttact
gctgatgtatatgcttcctccgttgttagtctgctgcaagctgacattaaatcagcttta
aagtctgcatttgatgctctggatggaccattgtccgtcactgattggtgcaaagggcgt
aaccaatcaggtgaagcagggaacacaggtgatggatattctgctgaatcaaatctaagt
gaatcaagttctgcagcagtatctatcggggaaccaatgagcccatctcaaacttccagt
ggaccatctagcctcaaagacggtgtgaaaatggatgagacatgccaaaggagattgaac
caagagaactgtagttctgaagcagatccgtcagtaggctctcggcttaggccaacgctt
tttgttgttcctttgccttctatacttcttgggtatcaggatgattggcttaagacatca
gcgagttctctacagctctgggaaaaggctccctttgaaccatatgccctgcccaaacct
attacttactgcgtagtatgcccaaacattgatccacttacttctgaagcttccgatttt
ttccaacaattggcaactgtttatgagacatgcaagctaggaactcatttacctcagagt
tttgggaatcaaatggatgtagattctgggaaattttcaaattctgggtttgttttactc
gattgccctcaagcaatgaggatagatagtcgtaatgcatctcttgttggctcaataagt
gattactttctctctctttccaacggttgggacttgacaagttatctcaagtctctctca
aaggctctgaaggctttgaagcttggcccttgcatatccacaaatgcgaaagaaggaagt
agtacttcatgtattgtaatatatgtggtatgccctttccctgagccaacagctgttcta
caaactgttgttgaatctgctgttgctcttggttcagttgttttccaatcagacagagaa
agaagatctatgctgcacagtcaggttgccaaggcattaagctgttctgcagctgtggat
gaggcgtcaatatcaaatgtattagtgctttctgggtttagtattcccaaattggtgctg
cagattgttacagttgatgccattttcagagttacaagtccatcacttagtgaacttgta
actctcaaggagattgcgttcactgtttacaacaaggctcgtcgaatgtcacgtggatct
tctaatgatgtcgtccactcatcatcattgtccgctaggcctcattcggtcttatcacaa
atgacttcccacactcctggaatgtggaaggattgcataggtcctcggattacagggcat
tccctgccaagagagggtgaaattgattctagcttgaggtctggtgcctgggataattca
tggcaaacaagaggtggatcaattgcctgtgatccaaacagaatgggagattactttctt
catgatgaaatccgttacatgtttgagccactttttatccttgctgaagctggttcttta
gaaaatgggtatacaccttttgcttctggtagttcagcctcagaatcttcaaagtctttg
ttggacgatagtagtggaagctatatgcagagttcaagtttggtgggaagtggtgatgct
gcctcaaactctcacattgatggatctgatatggataagaacgctccaagcttgcactgt
tgctatggctggtctgaggattggcgttggctggtatgcatttggactgatgctagaggt
gaattgcttgatagccaaatattccctttcggtggaattagcagtaggcaagacacaaaa
ggtctagagtgcctttttgttcaagttctgcaacaaggctgtcatatacttcaagcttgc
tcctctgattccggtgttgtgagacccagagattttgtgattgcacgcattggaagtttc
tatgaacttgaatatcaagagtggcagaaagccatcaattcagtggggggttctgaggtg
aaaaaatggcccttgcaattgcggcgatctgtgtccgatgggatacctgcaagcagtaac
ggaacttccttgcagcagcaggagatgagtttgattcaagagagaaatctaccttcttca
ccaaaccctctttatggtagccctcactcaaaaacatcaagctttatgaaaggtggctta
ggaggtcagcctgcagtaaggaagcacattatgagtggacacacagtgattgacaattca
aagggcctgcttcagtgggtacaaagcatcacctttgttgcgatttcgattgatcattcc
ttacatctagtttcacaagcagattcaccatctcctggaggaacacaagctggtctacac
tcggggtcctcgggatatctggaaggattcaccccagtgaagtctcttggttctacatcg
gcatcttacatattaatcccctcaccgagcatgcgtttcctctctccaacaccacttcag
cttcccacatgcctcactgccgaatcccctccactcgctcacctacttcacagtaaaggt
tctgcgatccccctctccactggtttcgtgatttcgaaagccgtaccatctatgagaaaa
gatagtaggcacaacttaaaagaggaatggccttcagctctctcaatcagtctcattgat
cattatggcggaaacagctttaatctcgagaaaatcaccagaggtccaataaaacaaggg
agaaggagttcaagttcagatccaaaagaattcgaaaccgatacccacttaattctcgag
tctgttgctgcagagctgcaagcgctctcgtggatgactgtgagcccgtcttacttagaa
cgacgaacggccttgccttttcattgtgatatggttttgagacttcgaagacttcttcat
tttgccgataaggagcttgctcggcatttagagaagtcgcaaactgggtaa
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integrated database retrieval system
