Humulus lupulus (common hop): 133781799
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Entry
133781799 CDS
T11341
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hlp04131
]
133781799
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hlp04147
]
133781799
Membrane trafficking [BR:
hlp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
133781799
Exosome [BR:
hlp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133781799
Exosomal proteins of bladder cancer cells
133781799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
TPR_COPA_B
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
WD40_RFWD3
NBCH_WD40
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_At4g14310
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
133781799
NCBI-ProteinID:
XP_062076860
LinkDB
All DBs
Position
6:complement(18848823..18854450)
Genome browser
AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKSGSPPDDMLR
LSQMNTDLFGGVDVVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTRRTGVQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYVKDRFLRYYEFSTQKDTQVAPIRRPG
STSLNQSPRTLSYSSTENAVLICMDAEGGSYELYSIPKDNISKGDNVQDAKRGVGGSAVF
VARNRFAVLDKSSNQVLVKNLKNEVVKKSVLPIATDAIFYAGTGNLLCRAEDRVVIFDLQ
QRLVLGDLQTPFVKYVVWSNDAENVALLSKHAIIIASKKLVHQCTMHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSANTIFCLDRDGKNRAIVIDATEYI
FKLSLLKKKYEHVMTMIKNSQLCGQAMIAYLQQKGFPEVALHFVKDEKTRFNLALESGNI
QIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLVTGNTDKLSK
MLKIAEVKNDVMGQFHNALYLGNVRERIKILENVGHLPLAYITASVHGLHDIAERLAEQL
GDNVPSLPEGKVPTLMIPPTPVMCGGDWPLLRVMKGIFDGHLDNFGKGSAVVEEEDEAAD
GDWGEELDMVDVDGSPNDVTAISEDGEATGENDEEGGWDLEDLELPPEADTPKAANARSS
VFVAPTPGMSVSQIWVQKSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLKSMFLDLQTG
SHSYLRAFSSAPVIPLAVERGWNESASPNARAPPALVYNFSQLEEKLKLGYKSTTGGKFT
EALRLFISILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRKELRDDPVRQQEL
AAYFTHCNLQLPHLRLALQNAMTICFKAKNLATAANFARRLLETNPPNENQSRTARQVLQ
AAERNMTDASELNYDFRNPFVICGATYVPIYRGQKDVSCPYCTSRFVPSQEGHLCTVCDL
AVVGADASGLLCCPAQIR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgagacgaagagtaatcgagtgaagggtctcagcttccacagtaag
aggccatggatccttgcgagtcttcacagtggtgtgatccagctatgggactaccgtatg
ggaactctgattgatcgattcgatgagcatgatgggccagtccgtggtgttcattttcac
aaatctcagccgctctttgtttctggaggggatgactacaaaataaaagtttggaactac
aagctgcataggtgtctttttacacttcttggacaccttgattatatccgtactgtgcag
ttccatcatgaaaatccatggatagtgagtgccagtgatgatcagactattcgcatttgg
aactggcagtcacgcacttgtatttctgtattaacgggtcataatcattatgtaatgtgt
gcttccttccatccgaaagaagaccttgttgtgtcagcctcccttgatcagactgttcgt
gtttgggacattggtgccttgagaaagaaatctggatctcctccagatgacatgctgcga
ttgagtcagatgaatacagatctttttggaggtgttgatgttgttgttaagtatgttttg
gagggtcatgatcgaggtgtcaattgggctgcattccaccccacccttcctctgattgtc
tctggagcagatgatcgccaagtcaaactgtggcggatgaatgacacaaaagcttgggaa
gtagacacattgagagggcacatgaataatgtttcatgtgtaatgttccatgccaaacaa
gacataattgtttccaattcagaagataaaagtatccgtgtctgggatgtaacaaggcga
actggggttcaaacattccggagagagcatgatcgcttctggattcttgcagctcatcct
gagatgaatctgttggcagcaggtcatgacagtggcatgattgtctttaagttagagagg
gagcgaccggcttttgcagttagtggtgatagtcttttctatgttaaagatcgattcttg
cggtattacgagttttcaactcaaaaggatacacaagttgctccgattagacgccctggt
tccactagtttaaatcaaagtcctagaactctcagttatagttctactgaaaatgctgtt
cttatatgcatggatgctgaggggggttcttatgaattgtattccataccaaaggacaac
attagtaagggtgataatgtacaagatgcaaagagaggtgttggaggatcggctgttttt
gtggctcgtaataggtttgctgttcttgacaaaagcagcaaccaagttctggttaagaat
ctgaaaaatgaggttgtaaagaagagtgtccttccaatagctactgatgctatattctat
gctggaactggtaacttgttgtgtagagcagaagatagagtggttatttttgatctccag
cagaggcttgtactcggtgatcttcaaactccctttgtcaagtatgttgtttggtctaat
gatgctgaaaatgttgcattgcttagcaagcatgccattataattgctagcaagaagctt
gtgcaccaatgtactatgcatgaaacgattcgtgtaaagagtggtgcttgggatgacaat
ggggtatttatttacactactttaaatcatattaagtattgcctgccaaatggagatagt
ggaatcatcagaacccttgatgttccaatatacataacaaaggtttctgcaaataccata
ttttgcctggatcgagatgggaagaacagagccatagttattgatgcaacagagtatatt
ttcaagctgtccttattgaagaaaaaatatgagcatgttatgaccatgataaagaactca
caactctgtggacaggcaatgattgcttatcttcagcagaaggggtttcctgaagttgct
ctccattttgtgaaagatgagaaaactcgtttcaatttggctttggagagtgggaatatt
caaatagctgttgcttcagccactgcaattgatgagaaagatcattggtacagattgggg
gtggaggctctgcgtcagggcaatgcaggtattgtggaatatgcctatcagaagacaaaa
aattttgagaggttatctttcttgtatcttgtaactggtaacacagacaagctatccaag
atgctgaaaattgctgaggttaaaaatgatgtcatgggtcagttccataatgctttgtat
ttgggtaatgttcgcgaacgcattaaaatcttggagaatgttggccacctgccacttgct
tacatcacagcttcagttcatggactacacgacattgctgaacgtttagctgaacaattg
ggagataatgttccatctttgccagaagggaaagtacctacccttatgattccccctact
cctgtcatgtgtggtggtgattggccacttctaagggtaatgaaaggcatttttgatggg
catttggataacttcggcaagggatctgctgtggttgaagaagaggatgaggctgctgat
ggtgactggggtgaagagcttgacatggttgatgttgatggctcaccgaatgatgtcact
gcaatatctgaagatggagaggctactggagaaaatgatgaagagggaggatgggacctt
gaagatttggagctacccccggaagcagacaccccaaaggctgccaatgcacgctcgtca
gtttttgttgctccaacacctggcatgtctgtgagccagatctgggtccagaaatcatct
cttgctgctgaacatgcagcagctggaaactttgacaccgcaatgcggttgcttaacagg
caacttggaattaagaactttgctccattaaaatccatgtttcttgatctgcagactggc
agccattcctatcttcgtgcattttcatctgctccagtgatacctttggcagttgaacgt
gggtggaatgaatctgccagccctaacgcaagagcccctccagcccttgtctacaatttc
tctcaattggaagagaagctcaaactaggatacaagtctacaactggtgggaagtttact
gaggctctccgtctcttcatcagcattctccatacaattcctttgattgttgttgaatca
aggagggaagttgatgaagttaaggagttgataattatcgtgaaagagtatgtgctaggt
ctgcaaatggagctgaagaggaaggaactaagagacgatccagtccgccagcaagagctt
gcagcctattttacccactgcaaccttcaactgcctcacttaaggctcgccttgcaaaat
gcaatgactatttgcttcaaagcaaagaaccttgctactgctgccaactttgccaggcgg
cttttggagaccaacccccctaacgagaaccaatctaggacagccaggcaagtgttgcag
gctgctgagaggaacatgaccgatgcttcagagctgaactatgacttcagaaacccgttt
gtgatttgtggtgcaacatacgtaccaatctaccggggacaaaaggatgtttcttgcccg
tattgtacttcgcggtttgtaccaagccaggaaggacatctctgtactgtttgtgatctt
gcagttgttggagctgatgcttctgggttgctgtgctgccctgctcagattcgataa
DBGET
integrated database retrieval system
