Humulus lupulus (common hop): 133782005
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Entry
133782005 CDS
T11341
Name
(RefSeq) serine/arginine-rich splicing factor SC35
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133782005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hlp03041
]
133782005
Spliceosome [BR:
hlp03041
]
Common components
Common spliceosomal components
SR proteins
133782005
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
133782005
NCBI-ProteinID:
XP_062077127
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All DBs
Position
6:31145713..31149231
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AA seq
240 aa
AA seq
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MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA
FVRYKYADEAHKAVDRLDGRVVDGREITVQFAKYGPNAERIHKGRISEVSPRSSYRSRSR
SPRRRNRDDCRDRDYRRRSRSRSYDRYERDRYNRRDVDYHSRRRSRSTSSDNSRRVRDHY
EGEGQSRSRSRSRSVDSASPARRSLRPERSLSPRRIPSPSGESLDGQRRRGKSSSRSVSP
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttcggtaggtctggtcctcctgacatctctgacacctactctcttctcgtc
ctcaatattaccttccgtaccacggctgatgatctatttccacttttcgacaagtacgga
aaggttgtcgacatcttcatccccagagatcgaaggactggagagtcgaggggttttgcg
tttgtgcgctacaagtatgcagacgaggcacataaggcagttgataggcttgatggaaga
gttgttgatggccgagagataacagttcagtttgctaaatatggacccaatgcagagagg
attcataaaggaaggattagtgaagtctctccaagatcaagctacagatcaagaagtcgc
agtcctaggagaaggaatcgggatgactgcagagaccgagactatcggaggagaagccgc
agtagaagttatgatagatatgagcgtgaccgttacaataggagggacgtggattatcat
agtcgaaggagaagcaggagtactagttctgataatagcagaagggtaagggaccactat
gaaggtgaaggacagagtcggagtcgaagtcgatcccgatctgttgacagtgcctctcca
gcacggcgtagtcttagacctgaaagaagtctttccccgcgaagaattccatcaccaagt
ggtgaaagcctagatggacagagaaggaggggaaaatcttcttctcggagtgtgtctcct
tga
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