Humulus lupulus (common hop): 133782083
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Entry
133782083 CDS
T11341
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7 isoform X1
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlp03009
]
133782083
Ribosome biogenesis [BR:
hlp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
133782083
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_VPS8
WD40_Gbeta
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Cytochrom_D1
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
133782083
NCBI-ProteinID:
XP_062077247
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Position
6:38520078..38525499
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AA seq
537 aa
AA seq
DB search
MGVEEENGTLEKTVPPAEQQIFDELDIKIKKYLRGEGANLEVLKDKKLKGQLAVREELYG
KSAKVAAKTEKWLMPSVGGYLEAEGIEKTWRIKQEVIAKEVDILSSRKQFDIILPDLGPY
TLDFTSSGRYMAVGGRKGHLAIVDMKNMNLTKELQVRETVRDVVFLHNELFFAAAQKKYT
YIYNRDGTELHCLKDHGSVLRLQFLKNHFLLASINKFGQLHYQDVTMGEMVGNYRTGLGR
TDVMQVNPFNAVVALGHSGGTVSMWKPTSSAPLLKILCHRGPVSALAFHPNGQLMATAGK
EKKIKLWDLRKLDRELQDIQGHAKTLDFSQKGLLARGTGSHVQVLGDFSGAQDYSRYMNH
SIVKGYQIGKVLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEV
RSLLDKLPPETIMLDPTNIGSVRPAKKKNLTKQEKEAEMEAAIEAAKETEFKYKTKGKNK
PSKRVKKKQEVISKAKRPFLDQHMKEEEQIARKKQRPSEEAVLPVSLQRFARKKEST
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggaagaagaaaatggaactcttgagaagactgtacctccagctgaacagcag
atctttgacgagttagacataaaaataaagaagtatcttagaggagaaggtgctaacttg
gaggtattgaaggataaaaagttgaaggggcaacttgcagtcagagaagaattgtatggc
aagtctgcaaaggttgctgccaagactgagaagtggcttatgccaagtgtgggaggctac
ctagaggctgaaggaatagagaagacatggaggatcaagcaggaagtaatcgctaaagaa
gttgatattttaagttcaagaaaacaatttgatattattttgccagatcttggtccatac
acactggattttacctcaagtggtcgttatatggctgttggtggcagaaagggccatctg
gccattgttgacatgaagaatatgaatctaactaaggaattgcaggttagggaaacagta
cgtgatgtggtgttcctgcacaatgaattgttctttgctgcagcccagaaaaagtacaca
tacatttataacagggatggcacagagcttcactgcttgaaggatcatggctcagtttta
aggcttcaatttttgaagaaccacttcctattggcatcaataaacaaatttgggcaactt
cattatcaggatgtaaccatgggtgagatggtaggtaattacaggactggtttaggccgt
actgatgtaatgcaggtgaatcctttcaatgccgttgttgctttgggccattcaggcggt
actgttagcatgtggaagcctacaagttctgctcctcttctcaagattttgtgtcaccgt
gggcctgtctcagcattggcgttccaccccaatggacaactcatggccacagctggaaaa
gagaagaaaattaaactttgggacttgaggaaactcgatagagagctccaagatatacag
ggccatgcaaagaccttggatttcagtcagaagggtttgcttgctcgtggaaccggatct
catgtacaagttctgggagacttctctggagctcaagactacagcagatacatgaaccat
tctatagtcaaaggatatcaaatagggaaagtgttgtttagaccttacgaagatgttttg
ggcatagggcactcgatgggctggtctagtattctcattccaggttccggggaacccaac
tttgatacttgggttgcaaatccattcgaaacatctaaacagcgaagagagaaggaagta
cgctctcttcttgacaagctccctcctgaaacaatcatgttggatcccacaaacattggt
tcggtgaggcctgcaaagaaaaaaaatctaacaaaacaggagaaagaggctgagatggag
gctgctattgaagctgccaaagaaaccgagtttaagtataaaacaaaaggaaagaataaa
ccaagtaagagggtgaagaagaaacaggaggtaatatccaaagctaagaggcctttcttg
gatcaacatatgaaggaagaagaacagatagctagaaagaagcaaagaccaagtgaagaa
gctgtgctaccggtttctttgcagcggtttgcccgaaagaaagaatctacttga
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