Humulus lupulus (common hop): 133782190
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Entry
133782190 CDS
T11341
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133782190
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133782190
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
MOEP19
Motif
Other DBs
NCBI-GeneID:
133782190
NCBI-ProteinID:
XP_062077391
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Position
6:complement(57320947..57326836)
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AA seq
480 aa
AA seq
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MATNEPTVNGVAKAPESDSQSLVSTTAFETGATTTSASEAETAVATPTESQLEPTSAPPS
ATTTASDKRWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTP
DRIVLISGKEEPDVPLSPAMDAVIRVFKRVSGLSESEVDGKVPGAAGVAFFSIRLLVAST
QAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEGLKVLKALEAVI
AHLRKFLVDHSVLPLFEKKTYNAPTSQEQHVETWADKPSSHGASQTGLAANYPLSAKRES
LFLERENQLESQIPSARISLYGQDPSLPAIRSSGLGSSGLGSSGLGRTGAPIVTQIAQTM
QIPLTYAEDIIGIEGSNIAYIRRTSGAILTVQESMGLPDEITVEIKGTSTQVQLAQQLIQ
EVMSNHKESLSSSYGRIDTGLRSSYSQLSSSSYPPTSLPSQPYSGGYGSSSLGGFSTFRL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaacgaacccaccgtgaacggcgtcgcgaaggcgccggaatcggactcgcaa
tctctggtttccactacggcattcgaaacgggggcgaccactacctccgcctctgaggcc
gaaacagcggtggcaacccctactgagtcccaactagagcccacctcagctcccccgtca
gctaccaccaccgcctccgacaagaggtggcctggatggccaggagattgcgtgttcagg
ctcattgttccggtgctcaaggtcggtagcatcattggccgcaagggggagcttatcaag
aagatgtgtgaggagacgcgtgcacgaattcgagttctcgatggcgccgtaggcactcct
gatcgaatcgtgttgatatcgggaaaggaagagccagatgttccactttcgccagcgatg
gatgctgttataagggtgtttaaacgtgtctcgggattatctgagagtgaggttgatggt
aaggtccctggagctgctggagttgcattcttttctattcgattgttggttgcatccaca
caagctataaatttaattggaaaacaaggttcattgatcaaatccatacaggagaacact
ggtgcatctgtgcgagtattgtcaggagatgaggtgccattctatgctgctgcagatgaa
agaattgttgagttgcagggagaagggttaaaggttctcaaagctctggaagcagtaatt
gctcatctgaggaaatttttagtcgatcatagtgttcttccactttttgagaagaaaact
tacaatgcgccaacctcacaagaacaacacgtagagacctgggcagacaagccatcatct
cacggtgcttctcaaactgggcttgcagctaattatcctctctcagcaaagagggaatct
ctgtttcttgagcgtgaaaatcaactggaatcacagattccatcagctcgaatttctctg
tatgggcaggatccatcacttcctgctattcgttcttcaggtcttggttcttcaggtctt
ggctcttcaggtcttggtcggactggtgctcccattgttactcagattgcacaaactatg
caaatcccacttacttatgcggaagacattatcgggattgaaggatctaatattgcatac
attcggcgtaccagtggagccattttaactgtgcaagagagtatgggacttcctgatgaa
atcactgtggaaatcaaaggaacctcaacacaagttcagttggctcaacaactaattcag
gaagttatgagcaatcacaaagaatcactttcgagtagctatggcaggatagatactgga
ttgagatcttcatactctcagttgagcagctcttcctaccctccgacttcattaccctca
cagccctacagtggtggttacgggtcttccagtctcggaggtttcagtacattcaggctt
tga
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