Humulus lupulus (common hop): 133782682
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Entry
133782682 CDS
T11341
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03018
RNA degradation
hlp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133782682
09123 Folding, sorting and degradation
03018 RNA degradation
133782682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133782682
03041 Spliceosome [BR:
hlp03041
]
133782682
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133782682
mRNA degradation factors
5'-3' decay
Lsm complex
133782682
Spliceosome [BR:
hlp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
133782682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
RimP_C
Motif
Other DBs
NCBI-GeneID:
133782682
NCBI-ProteinID:
XP_062078014
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All DBs
Position
6:164816267..164819289
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDADDPLKT
TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcaggaaagaaacagtattggatctcgccaagttcgtggacaaaggtgtacaa
gtaaagctcactggtggtagacaggtaacagggactttaaaaggatatgatcagctgttg
aaccttgttctggatgaagcaatagaatttcttagagatgctgatgatcccttaaagaca
actgatcagaccagaagccttggtttaatagtttgtagagggactgctgtgatgcttgtg
tctccaactgatggtacagatgagattgccaacccttttatccagccagatggagcttag
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