Humulus lupulus (common hop): 133782999
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Entry
133782999 CDS
T11341
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2 isoform X1
KO
K03255
protein TIF31
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hlp03012
]
133782999
Translation factors [BR:
hlp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133782999
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
CLU
TPR_MalT
TPR_8
PAM2
Motif
Other DBs
NCBI-GeneID:
133782999
NCBI-ProteinID:
XP_062078481
LinkDB
All DBs
Position
6:203110590..203123967
Genome browser
AA seq
1854 aa
AA seq
DB search
MAPKASKAKPHKAKGDKKKKEEKVLPTVIEISVETPEDSQVTLKGISTDRILDVRKLLGV
HVETCHWTNYSLSHEVRGPRLKDSVDILSLKPSHLTIVEEDYTEELAVAHIRRLLDIVAC
TTSFGSSASKLAGRPNPKEPGLNDTETGSNAATTTATVNAGAGEQKPGAAAIAGVQKSSS
YDAKTGECVDPAVSMCPPPRLGQFYDFFSFSHLTPPLHYIRRSTRPFLEDKTEDDFFKID
VRVCNGKPTTIVASKKGFYPSGKRLLLSHSLIGLLRQISRAFDATYNALMKAFTEHNKFG
NLPYGFRANTWVVPPVVADNPSVFPPLPVEDENWGGNGGGQGRGGKHDHRSWAKEFAVLA
AMPCKTAEERQIRDRKAFLLHSLFVDISVHQAVAVIRSLIDTNQDSLNDPTVSLVHEERV
GDLIIKVTRDVPDASTKLDSKNDGSQVLGMSQDELAKRNLLKGITADESATVHDTATLGV
VVLRHCGFTSVVKVSADVNWEGSPIPQDIEIEDQPEGGANALNVNSLRMLLHKFSSPQKL
QSSDHENSHPAKSLVRKVLEESLSRLQEEPNMQMKSIRWELGACWVQHLQNQASGKTETK
KTEEAKQEPAVKGLGKQGGLLKEIKKKIDVKSSKIEQGKEFPAGNNLDMDKNADANNQKE
LEKQDVEKEMSVIWKNLLPEAAYSRLKESDTGLHLKSPDELIEMAHTYYADTALPKLVAD
FGSLELSPVDGRTLTDFMHTRGLQMCSLGRVVELADKLPHVQSLCVHEMLMRAYKHILQA
VIAAVDNVADLAASIASCLNILLGTPSTENVNANSTDDGKLKWSWVETFLSKRFGWQWKY
ENGQDLRKYAILRGLCHKVGLELVPKDYDMDSASPFQKSDIISMVPVYKHAACSSADGRT
LLESSKTSLDKGKLEDAVNFGTKALAKLVSVCGPYHRMTAGAYSLLAVVLYHTGDFNQAT
IYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSH
PNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGVDHIQTAASYHAIAIALSLME
AYSLSVQHEQTTLQILQAKLGLEDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDASIS
SKGHLSVSDLLDYITPDADMKAREAQKRARSKVKGKLGQNEEAVSDEHQKDEIVLPTFPS
AENSSDKENKSEVQIAEPRNEKPDSSQPDQSDVLSANVDLALDDISDEGWQEAVPKGRSL
TGRKPSGSRRPSLAKLNTNFINPSQTTRHRGKPNNFAPAKTSPNEPNASTSNPTKKFSKS
ASFSPKLANSATPVNGGAERPSNPKSAPATPASLDSVAKAAPSPSVQAAGKLFSYKEVAL
APPGTIVKAVAEQLPKDPLPLEHNSQVSQEGAATDATLGEVSTVKDADAKNKAEKTKNLD
NEKKHAKVEKSAVDESLKVGKTLIVGDVEVETKNIDLKNIAVETKQAKSGSFAVRGVEKS
VDSKNTKAGKNEQPEAAELEKDTELVLTENTNLLQEKEISTDANLKAGDTDEKSCDSPDG
DTVDKSVPTEGEKQDEAETGKESTKKLSAAAPPFNPTTIPIFGTIPVPGFKEHGGILPPP
INIPPMLTVNPVRRSPHQSATARVPYGPRLSGGFNRAGNRVSRNKSTYHNGEHIGDGNHF
SPPRIMNPHAAEFVPGQPWAPNGYPVSPNGYLTSPNGYPVSPNGYPTSLNGIAVTQNGFL
LSPVSPVESPCLVNVDTGEENNTIEAPAEESTEKSSTEAGCESQSTEEKPVEVESVVTSN
PDPKTEENQADIVPEAAGDTEVARDASIIVIEEKPSKCWGDYSDTEAEVIEVAS
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaggcaagcaaagctaagccacacaaagctaaaggagataagaagaagaaa
gaagagaaagttttgcccacggtaattgaaatttcagttgaaacaccagaagactcacaa
gtgacccttaagggtatatctacggacaggatcttggatgtgagaaaacttttgggagta
catgtggagacatgccattggaccaattactccttatcacatgaggtccgaggacccaga
ctgaaagactcggtggacatcctctctcttaaaccatcccacctcaccatcgttgaagag
gattacacggaagagctagcggtggcccacatacggcggcttttggatatcgtggcctgc
accacctccttcggctcctccgcctccaaactcgccggccgaccaaaccctaaagaacca
ggtttgaacgacaccgaaaccggttcaaatgctgctactactacagctacagtcaatgcc
ggcgccggcgaacagaaaccgggagcagcggccatcgccggcgtccagaaaagttcgagt
tacgatgcgaagactggagaatgtgttgatccggcggtctccatgtgtccgccgccgagg
ctcggccagttctacgacttcttctctttctctcacctcacgcctcctctccattatatt
cgaaggtctactcgtcccttccttgaggataagacagaagacgactttttcaaaattgac
gtccgagtatgcaatgggaagccaacgacaatagttgcctcaaaaaaagggttttatcct
tctggaaaacgtcttcttttaagtcactctttgattggtcttcttcggcaaatcagcaga
gcatttgacgcaacatacaatgctcttatgaaggcttttacggagcacaataagtttggc
aatcttccatatggtttccgagcaaacacatgggttgtccctcctgttgttgctgataat
ccttcagttttcccaccgcttcctgtggaagatgaaaactggggaggaaatggtggtggt
cagggaagaggtggaaaacatgatcataggtcttgggcaaaagaatttgcagttttggct
gcaatgccatgtaaaacagcagaagagcggcaaattagagataggaaagcctttctgctt
cacagtctatttgttgacatttcagttcatcaagctgttgcggtaattaggagtctcatt
gacactaaccaagactccttgaatgatcccaccgtctcacttgtccacgaggaaagagtt
ggggatttaatcattaaggtgacaagagatgtgcctgatgcaagtaccaagttggattct
aaaaatgacggaagtcaggttcttggaatgtcacaggatgagcttgctaagagaaattta
ctcaaaggcataacagctgatgaaagtgcaaccgttcatgataccgcgactttaggtgtt
gtagttcttagacactgtggcttcacatctgttgtaaaagtttccgctgatgtaaattgg
gagggaagtcctattcctcaggacattgagattgaggaccagcctgaaggaggtgccaat
gccttgaacgtcaacagcctgagaatgctattacacaagttttcttcacctcaaaaacta
cagagttcggatcatgaaaattcacatcctgctaagtctttggtacgaaaagtactagaa
gaaagtttatcaaggttgcaggaagaacccaatatgcaaatgaaatctatcagatgggag
ttaggagcatgttgggtgcaacatttgcaaaatcaggcatcggggaaaacagagaccaaa
aaaacagaagaggctaaacaggagccagcggtcaagggtcttgggaagcaaggtggactg
ctaaaggaaataaagaagaaaatagatgtaaagagcagcaaaattgaacaggggaaagaa
ttccctgcaggtaacaaccttgacatggacaagaatgcagatgctaataatcaaaaggag
cttgaaaaacaagatgtggaaaaggaaatgtcagtgatatggaaaaatctgcttccagaa
gctgcatactcgcgccttaaagaatcagatactgggcttcaccttaagtctcctgacgag
ttgattgaaatggcacacacatactatgctgataccgcacttcctaaactggtggcagat
tttggctcacttgaactatcaccagttgatggaaggacattaacagattttatgcacacc
cggggtctgcaaatgtgctccctgggacgtgtggttgaacttgctgataagctccctcac
gtgcaatcactctgtgtacatgagatgcttatgagagcctacaaacacatactacaagct
gtcatagcagcagttgataatgttgctgacttggctgcatcaatagcatcgtgtttaaat
atattgctcggaacaccatcaactgaaaatgttaatgcaaattccacagacgatggaaaa
ttaaaatggagctgggtggaaactttcctttcaaagagatttgggtggcaatggaaatat
gaaaatggccaggacctaaggaagtatgctattcttcgtggattgtgccacaaggtggga
cttgagcttgtccctaaagactatgatatggacagtgcatctccttttcagaaatcagac
attataagcatggtacctgtttacaagcatgctgcttgctcatctgctgatgggcgtaca
ctattggaatcgtcaaaaacttccttggacaaaggcaaactggaggatgctgttaatttt
ggaactaaggcacttgcaaaacttgtgtcagtgtgtggaccttatcacagaatgacagca
ggagcatatagtcttctggctgtggtgctctatcatactggggatttcaatcaggctacc
atttatcagcaaaaagcactggatattaatgagagagagcttggacttgatcatcctgac
acaatgaagagttatggggatctagctgtattctactatcggcttcaacacacagaattg
gccctgaagtatgtcaatcgtgcattataccttctacacttaacatgtggtccgtctcat
cccaacactgctgccacgtacataaatgtagctatgatggaagaaggtttggggaatgtg
catgttgctttaagatatctccacgaggctctgaaatgtaatcagaggctacttggggtc
gaccacatacagactgctgccagctatcatgccatagccattgcactctctttgatggaa
gcatactccttgagtgttcagcatgagcagactaccctacaaattttgcaggcaaagctt
gggttagaggatctacgtacacaggatgcggctgcatggcttgagtattttgagtccaag
gccctggagcaacaagaagctgcacgcaatggtactccaaaaccagatgcctcaatctcc
agcaaaggtcatttaagtgtgtcagaccttttggattatatcaccccagatgctgatatg
aaagcaagagaagcccaaaagagagctcgttctaaggtcaaaggaaaattgggacaaaat
gaggaagctgtctcagatgagcatcagaaggatgaaattgtgttgcctacttttccctct
gctgagaattcaagtgataaagaaaacaaatctgaagttcagattgcagaacctagaaat
gagaaacctgattcaagccaacctgatcagtcagatgtgctgagtgcaaatgttgatttg
gcactggatgacatctcagatgaaggatggcaagaagctgttcccaaaggtcgttcactt
acaggtcgcaagccttctggttcaaggagaccaagtctcgcaaaactgaatactaacttt
atcaacccatcccaaacaacaagacatcgaggaaaacccaacaattttgcaccagcaaag
acatctccaaacgagcctaatgcatccaccagtaaccctactaaaaagtttagtaagagt
gcgagcttcagtcccaagttagctaactcagccacaccagttaatggtggagcagagaga
ccatcaaacccgaagtcagccccagctaccccagcttcattagattcagttgccaaggct
gcccctagtccaagtgttcaggcagctgggaagctgttttcctacaaggaagttgctttg
gctccaccagggacaattgtgaaggctgtggcagaacagttgccaaaagatccccttccc
ctcgaacataactctcaggtgagccaggagggtgctgcaacagatgcaacgcttggtgaa
gtgtcaactgtaaaggatgcagatgcaaaaaacaaagctgagaaaactaaaaatcttgac
aatgaaaaaaaacatgctaaggttgaaaaatctgccgtagatgaatctttgaaggttggg
aagactctgattgttggagatgtggaagtggaaactaaaaatatagatttgaaaaacatt
gcagttgaaaccaagcaagcaaaatctggaagttttgctgttcgcggagttgaaaagtct
gttgattctaaaaacactaaggctgggaaaaatgagcagcctgaagcagcagagctggag
aaagatacagaattagttttaactgaaaatacaaatctgttgcaagagaaagagatctcc
actgatgcaaacctgaaagcaggagacacagatgaaaaatcttgtgattcaccagatggt
gacacagttgataaatcagtgccaactgaaggagaaaagcaggatgaagccgaaactgga
aaggagtcaacaaagaaactttctgcagctgcccctccattcaatccaacaacaatcccc
atctttggcactatcccggttcctggattcaaagagcatggaggaattctgccccctcct
ataaacattcctcctatgctgacggttaatcctgttcgaagatcgcctcaccagtcagca
acagcaagagttccatatggtccacggttgtctggtggcttcaacagagctggaaatcgg
gtttcacgtaacaaaagcacttaccacaatggcgaacacattggtgatggaaaccatttc
agtcctcctagaataatgaacccacatgcagctgagtttgtaccaggtcaaccatgggct
cccaatggctatccagtatctccaaatggctatttgacatccccaaatggttatcctgtg
tccccaaatggatatccaacatcactaaatggtattgcagtgactcaaaatggttttctg
ctatctccagtcagcccagtagaatcaccatgtttggtgaatgttgacacaggtgaagaa
aacaatactattgaggctccagcagaagaaagcaccgagaagtcctcgactgaagctgga
tgcgaatcgcagtcaactgaagagaagcccgtagaagttgaatcagtagttacttcaaac
cctgatcccaaaacagaagaaaatcaagctgatatagttcccgaagctgctggggatact
gaagtagcgagagatgctagtattatagtaattgaggaaaaaccatccaaatgctgggga
gattacagtgacaccgaagctgaggtcattgaggttgcaagttga
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