Humulus lupulus (common hop): 133784435
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Entry
133784435 CDS
T11341
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133784435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hlp03041
]
133784435
Spliceosome [BR:
hlp03041
]
Complex A
Other components
Complex A specific factors
133784435
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_1
SF1-HH
Motif
Other DBs
NCBI-GeneID:
133784435
NCBI-ProteinID:
XP_062079770
LinkDB
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Position
1:complement(6666017..6672189)
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AA seq
752 aa
AA seq
DB search
MSGTAVSSTSTGSSQKVPMFAAKAGFVIPKNKLSGSLVPIFRGVKNPGGSDTLNGESTKL
TPRKTKWGPDLTQDASVRRVRAFAYQVPLSDITACVVAQIFPDSGXDQIYQQLKSGISEL
GFPGNSASDAQSPDHELSSHLIAIEKLEELELEKREAIGEILKLNPSYKAPSDYKPLMRE
ARVFIPVKEYPGYNFVWLIFGPGGENLKRLEKETGAKIQVYRTNIDNGQKIEIKQSDGNE
VHNTYEDLYVHISADTFEKVDAAVAVIELLITSVKGNLASTSTTSNSASAADARVSLGQD
VATSDPAHSSAMQPVPGPTSTPPQGQVQYSGQWFPGGPPPNMVLHQPSGFNPPNSSAFGL
NIPANMSTSPFKHSNMPSLFGPPPGQGGFNYIPQNPNLVSHEPQPPAQVLQHQYMAQSGP
GPFGPRNPSLMAPQFSSVPASNASVPYPSTGSQLSPMSFTRPSMPSLPRPVSNLPQGSQP
ANTPPSAGFSNMAPRMVQTHLHQPVVSPHAPAPVYGSFGNPTLGSAPNPPPGPSMQSGIP
SSVSGNAANFTPAKPQLLTAPSSGSFTFQPHRPQNPPSQAGPRPNNHFAQNAPPTNSILP
SPASQSLRMPMPNLSQSGNHGFSRPPVGNHMGQPQSHMPVSPFARDPTGMSGPSRLPTFA
DGSTLAPRNQMMQGGPGPRNFSPSPQIPSFPGHFPPRPGNHAQHQNYPVQASHSFAASGR
SAPAPGEQQLYDPFSPTSMPITPQHQGGFPRR
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaacagctgtttcttcgacatcaacaggtagtagccaaaaagttcctatgttt
gctgcaaaggctgggtttgtcataccgaaaaacaagttgtctggttcattggttcccata
ttccggggagttaaaaatcctggaggcagtgatactttaaatggagaaagtaccaaactg
actccaaggaaaacaaaatggggacctgatctgacccaggatgcttctgttaggagagtg
agagcctttgcttatcaggtgccactaagtgatattactgcctgtgtggtggcacaaatt
tttccagactcgggtnnagatcaaatttatcagcaactcaaatccggaatatcagagctt
gggttccctggcaactcagcatcagatgctcaaagtccagatcatgaactgtccagtcat
ctaatagccattgagaagttagaagaattggagctcgaaaagcgggaagcaataggtgaa
attctaaaattaaatccaagttacaaggctccatctgattataaacctttgatgagagag
gccagagttttcatacctgtcaaagaatatcctggttataattttgtttggctaatattt
gggcctggaggtgagaacttaaaacggctggaaaaggaaactggagcgaagattcaagta
tacagaacaaacatagataatggacagaagattgagataaaacagtctgatgggaatgaa
gttcacaatacttatgaagacttatatgtccatatatcagctgacacattcgagaaagta
gatgctgcagttgctgtcattgagcttctaatcacctcagtaaaaggtaacttggcttct
acatccactacttctaattcagcttctgcagctgatgcccgtgtttctttaggccaggat
gtggccacttctgacccagctcatagttctgcaatgcaaccggtgccaggacctacatca
acgcctccacaaggacaggttcagtactctggtcaatggtttccaggaggcccaccacct
aacatggtgttgcatcaaccttccggcttcaatccacccaattcttcggcttttggtctg
aacatccctgccaacatgtcaacctcgcctttcaaacattcaaacatgccttcactgttt
ggccctccaccaggtcaaggtggattcaactacattccccaaaacccaaatcttgtttcc
catgaaccacagccaccagcacaagttttacagcatcaatacatggctcagtcaggtcct
ggcccttttgggccgagaaatccttctttgatggctccacagttttcctcagttccagca
agtaatgcttcagttccatatccatctactgggagccaactttcaccgatgagtttcacc
aggccttcgatgccttcattaccccgacctgtctctaaccttccacaagggtctcaacct
gccaatactccaccatctgcagggttcagtaatatggctccaaggatggtccagacacat
ttacatcaacccgtagtttcaccacatgcacctgcacctgtgtatggatcttttgggaac
cctactttaggatccgcaccaaatcctccgccaggcccatctatgcaatcaggaattcca
agttctgtttctggaaatgcagcaaattttactcctgcaaaaccgcaattgctaacagct
ccaagttctggtagttttacttttcaacctcaccgtccacagaacccaccctctcaggca
ggtcccaggccaaacaatcatttcgctcagaatgctccacccaccaattcaatattgcca
agtccagcatcccagtctttacggatgccaatgcctaatttatctcagtctggcaaccac
gggttttcaaggccaccagttggcaaccacatgggccaacctcaatctcatatgcctgtt
agtccctttgccagagatccaactgggatgtcaggtccttccaggcttccaacatttgca
gatggaagtacccttgcaccaaggaatcagatgatgcaaggggggcctgggccacggaac
tttagcccatctccccaaattcctagttttcctggccatttccctcccaggccaggaaat
catgcccagcatcaaaattatcctgttcaggcaagtcactcctttgctgcttctggtaga
tcagctcctgctccgggagagcagcaactgtatgatccgttctcaccaacgtcgatgcca
attacaccgcaacatcagggaggattccctagaaggtga
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