Humulus lupulus (common hop): 133784762
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Entry
133784762 CDS
T11341
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133784762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133784762
04121 Ubiquitin system [BR:
hlp04121
]
133784762
03036 Chromosome and associated proteins [BR:
hlp03036
]
133784762
03400 DNA repair and recombination proteins [BR:
hlp03400
]
133784762
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
133784762
Ubiquitin system [BR:
hlp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133784762
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
133784762
DNA repair and recombination proteins [BR:
hlp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
133784762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
zf-RING_UBOX
zf-HC5HC2H_2
zf-C3HC4
zf-C3HC4_4
zf-RING_6
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
RTT107_BRCT_5
PHD_NSD
zf-RING_10
zf-Nse
Motif
Other DBs
NCBI-GeneID:
133784762
NCBI-ProteinID:
XP_062080026
LinkDB
All DBs
Position
1:complement(7605491..7610995)
Genome browser
AA seq
710 aa
AA seq
DB search
MAGSQSLICDSRSGSGSGSGRFNPWVLNFQKLGLELKCPLCLNLLNRPMLLPCNHVFCYS
CIPGSTQFGAECPVCQAHFVDQDPRHLPFLENMATIYRCLDATCSTNLFLPVKSEGGGVL
LQNPTSTMVRFDDKMSTELAENGKENNSHSGQSINTRVGVEKNDKIVNSCTAVDATRLGI
EFRGAVIPNSSPRSQFMTMDVDAKAVLQPAPDSPPSFGDAKCSDNDSYYPWSEHSSENSM
LKRPTQENDGAVVGKLKNYSSSFENDNDVRDVKRHKQLNCGLVPLDPGRDAHIQPVFHSK
LEQTVLKAGLQEPNILDVNKYDCVFCHSSKITEDTGSMLHYSNEKLVIGHEASFPNVIHV
HKVCIDWAPQVFYEDDIAKNLNEEVARGAKLKCSACGLKGAALGCYVRTCRKSYHVPCAM
RISKCRWNHEQYLVLCPAHSYVKFPNEKSKAKPKKALSDRPLPTIVSCQLSNKVALPGGD
INRENILVLCGSALSSEEKILLVTFGKMKGAAVSKFWSPNVSHVIAATDEKGACTRTLKV
LMAISNGRWIVNVDWVKACMESKYHVDEEPYEVILDNYGCYDGPKNGRLRASSNAPKLFS
GLNFYFLGDFLPSYKDDLQDLVIAAGGTVLESREELATQRTDQQAVRTPKAFVVYNIDPP
EGCKLGDEVSILWQRLSEAEDIASRTGAQVIGHTWLLESIAGYKLQPVVS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcgggatctcaatctttaatctgcgacagcagaagtggtagtggtagtggtagtggt
aggtttaatccatgggttctcaattttcaaaagttgggtctggagctcaaatgccctctc
tgtttgaacttgctcaatcgacccatgttgcttccatgcaaccacgttttctgctactcg
tgcatacctggttcgactcagtttggcgcagagtgccctgtctgccaggcccattttgtc
gatcaagatccgaggcatttgccattcctagaaaacatggcaacaatctatagatgtttg
gacgccacatgttctaccaatttgtttctgcctgttaaatctgaaggtgggggagttttg
ttgcaaaaccctacttcaactatggtcaggtttgatgataaaatgagtacagagttagct
gagaatggtaaagagaataattcacacagtggacagtctattaacactcgagtaggagtg
gaaaagaatgacaaaattgtaaacagctgcactgcagtagatgctacaaggctagggatt
gaatttcgtggtgctgtgattcccaactcatcacctagatctcagtttatgactatggat
gtagatgcaaaggcagtgttgcaaccagcaccagacagccctccttcatttggcgatgcc
aaatgttcagataatgatagctattatccctggagtgagcatagctcagagaattctatg
ttgaaaagaccaactcaggaaaatgatggtgctgttgtaggcaagctcaagaattacagt
tcatcctttgaaaacgacaatgatgtcagggatgttaagagacacaagcagttaaattgt
gggctagtaccattagacccgggccgtgatgctcacatccaaccagtttttcattcaaag
cttgaacagacagtattaaaagctggtctgcaggaaccaaatattcttgatgttaataaa
tatgattgtgtgttttgccattcttctaaaattacagaggatacagggtcaatgttgcat
tattccaatgaaaagttggtaataggtcacgaggcctcatttcctaatgtaatacatgtt
cacaaagtgtgcattgactgggctcctcaagttttctatgaagatgatatagctaagaat
ttgaatgaagaagtggcaaggggtgcaaaactcaagtgcagtgcatgtgggctaaaaggg
gcagctttgggatgctatgtgagaacctgtcgcaagagctaccatgtaccttgtgcaatg
cgaatctcaaaatgtcgttggaatcatgaacaatacctagtactctgtccagctcactct
tatgtcaagttccctaatgaaaagtcaaaggctaaacctaagaaagctctctcagatcga
cccctgcctaccatagtgagctgtcagctatcaaataaagttgctttaccaggaggtgat
atcaatagggagaatatattggttttatgtggatctgctttgtcttctgaggagaagatt
ctcttggtcacttttggtaaaatgaaaggtgctgctgtgtctaagttttggagcccaaat
gtgtcccatgtgattgctgccacagatgagaagggtgcttgcactcggactcttaaagtt
cttatggcaatttcaaatggaagatggattgttaatgttgattgggttaaggcatgcatg
gaatcaaagtatcatgtagatgaagaaccttatgaagttatactcgacaactatgggtgt
tatgatggtcctaagaatggcaggcttagggcatcgagtaatgcaccgaagctctttagt
ggcttgaatttttatttcctgggtgattttctaccttcttacaaggacgatctgcaagat
ttggtcatagctgccggagggactgtattggaaagccgggaagaactggcaacacaacgt
actgatcaacaggcagttcgaactcccaaggcatttgttgtttacaatattgatccccca
gaaggatgcaaactgggggatgaagtttcaatcctatggcaaaggttaagtgaggcagaa
gatatagcttcgcgaactggagctcaagtgattggtcacacatggctgctggagtccatt
gcagggtacaagttgcagcctgttgtcagctaa
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