KEGG   Humulus lupulus (common hop): 133786509
Entry
133786509         CDS       T11341                                 
Name
(RefSeq) histone deacetylase 19 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hlp  Humulus lupulus (common hop)
Pathway
hlp03082  ATP-dependent chromatin remodeling
hlp03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:hlp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    133786509
   03083 Polycomb repressive complex
    133786509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hlp03036]
    133786509
Enzymes [BR:hlp01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     133786509
Chromosome and associated proteins [BR:hlp03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     133786509
   HDAC complexes
    Sin3A-HDAC complex
     133786509
    BRAF-HDAC complex
     133786509
    REST complex
     133786509
    SHIP complex
     133786509
    MiDAC complex
     133786509
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     133786509
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    133786509
  Chromatin remodeling factors
   NuRD complex
    133786509
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 133786509
NCBI-ProteinID: XP_062081467
LinkDB
Position
1:15498998..15502655
AA seq 493 aa
MDTGGNSLSSGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VHKPYPARDRDLCRFHADDYVHFLRNITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIDDIGHAKGKYYSLNVPLDDGI
DDESYHFLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQSLDEIRNKLLDYLSKLQHAPSVQFHDKPPDTDLPEADEDHDDPDERWDPDSDMDV
DDDRKLLPCRVKREVENEAKEQENQKGNAENTKGYDTAGDDSTFPGLDVGSLVISEPIVK
VEQENTNKPADQM
NT seq 1482 nt   +upstreamnt  +downstreamnt
atggatactggggggaactcactctcatctgggcctgatggagtgaagaggaaggtctgc
tatttctacgacccagaagtgggtaattactactatggacaaggtcaccccatgaaacct
catcgaatcagaatgacccatgctcttcttgcccactatggtcttcttcagaatatgcag
gttcacaaaccctacccagctagggacagggacctttgccgctttcatgctgatgattac
gtccactttttaaggaatataacccctgaaacccaacaagaccaactgaggcaactcaag
cgcttcaatgttggagaggactgccctgttttcgatggcctttactcgttttgccagacc
tacgcaggtggctcagtcggtggcgctgtcaagttgaatcatggtctatgtgatattgct
atcaactgggctggtggccttcaccatgctaagaagtgtgaggcttctgggttttgctat
gtcaacgatatcgttttggccatcttggaacttcttaaacagcacgagcgagtattgtat
gtggacattgatatccaccatggagatggagtggaggaagcattttacacaactgatagg
gtcatgactgtttcattccacaagtttggagattatttccctggtactggggacatagat
gatattggacatgcaaagggaaaatactactcccttaatgttccacttgatgatggaata
gatgatgagagctaccatttcttgtttaaaccgattatgggaaaagtgatggaagttttt
aaacccggtgctgtggtccttcagtgtggtgctgattccttatctggagacagattagga
tgcttcaatctttctatcaaaggtcatgcggagtgtgtcaaatatatgagatcatttaat
gtaccactattgcttctaggtggcggtggatataccattcgaaatgttgctcggtgctgg
tgctatgagacaggagttgcactaggagtagaagttgaagacaaaatgccacagcatgag
tactatgagtactttggtccagactatactcttcatgttgctcctagtaacatggaaaac
aagaattcacgccaatcactggatgaaatacgaaataagttgctcgattatctttccaag
cttcagcatgcacctagtgtccaatttcacgataaacctcctgacactgatcttccagag
gctgacgaagatcacgatgacccagatgagagatgggatccagattctgacatggatgtt
gatgatgatcggaaacttttaccctgcagagtaaagagagaagtggaaaacgaagctaag
gaacaggagaatcagaaaggaaatgcggagaatactaaaggctatgatactgcaggagat
gattctactttcccaggtttggatgtgggttctttggtaataagcgaaccaattgtgaaa
gtggagcaagagaatactaataagccagctgaccagatgtaa

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