Humulus lupulus (common hop): 133787714
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Entry
133787714 CDS
T11341
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133787714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133787714
03009 Ribosome biogenesis [BR:
hlp03009
]
133787714
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133787714
Ribosome biogenesis [BR:
hlp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
133787714
Pre-60S particles
133787714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT_GCN1
HEAT
TPR_IPO5
IBN_N
TPR_IMB1
TPR_DNAAF5
TOR1L1_N
HEAT_2
CEP104-like_TOG
HEAT_MROH2B_C
CLASP_N
PDS5
HEAT_Maestro
Ltn1_1st
Usg
Motif
Other DBs
NCBI-GeneID:
133787714
NCBI-ProteinID:
XP_062081549
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All DBs
Position
1:complement(17641046..17655723)
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AA seq
897 aa
AA seq
DB search
MAAAATTASAQWQPKEEGFTEICGLLEQQISHSSTSADKSQIWQQLQHYSQFPDFNNYLA
FIIARAEGKSADVRQAAGLLLKNNLRSAYKTMIPAYQQYIKSELLPCLGAADRNIRSTVG
TIVSAVVQLGGVAGWPELLQALVSCLDSNDLSHMEGAMDALSKICEDIPQELDGDIPGLA
ERPINIFLPRLFKLFQSPHSSLRKLSLGSVNQYIMLMPAALYASMDQYLQGLFVLSNDTV
SEVRKLVCSAFVQLIEVRPSFLEPHLKNVIEYMLQVNKDTDEEVALEACEFWSAYCEAQL
PPENLREYLPRLIPVLLSNMIYADDDESLIDAEEDESVPDREQDIKPRFHSSRFHGSEGG
EDDDDDIVNVWNLRKCSAAALDILSNMFGDEILPTLMPLVQTNLSNSGDEAWKEREAAVL
ALGAIAEGCINGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQGVGHQTGY
EQFDKVLLGLLRRILDTNKRVQEAACSAFATLEEEAAEELVPRLDVILQHLMCAYGKYQR
RNLRIVYDAIGTLADAVGAELNQPAYLEILMPPLIAKWQQLSNADKDLFPLLECFTSISQ
ALGTGFSSFAEPVFQRCINIIQTQQLAKVDPAAAGAQYDKEFIVCSVDLLSGLAEGLGSG
IESLISKSNLMDLLLQSCMDETCDVRQSAFALLGDLARVCPIHLRPRLPEFLDVAAKQLN
TPKLKETVSVANNACWAIGELAVKVRQEISPVVMTVISCLVPILKHAEGLNKSLIENSAI
TLGRLAWVCPDIVSPHIEHFMQSWCIALSMIRDDVEKEDAFRGLCAVVKANPSGAINSLV
AMCKAIASWHEIRSEELHNEVCQVLHGYKQMLVNGAWDQCMSVLEPPVKERLSKYQV
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgacgacggcgagtgcccagtggcaacccaaagaagaaggattcacg
gagatctgtgggcttttggagcagcaaatttctcattcgtctacttctgctgataagtct
cagatatggcaacaacttcagcactattctcagttccctgatttcaacaactatcttgct
ttcattatcgcacgggctgagggtaaatcagcagatgttcggcaagctgcaggcttgctt
ttaaaaaataaccttcggtctgcatataagactatgattcctgcttaccagcaatatatt
aagtcagagctgttgccctgcttgggagcagcagataggaacataaggtcaacagttgga
acaattgtaagtgctgttgttcaactaggaggagtagcaggatggcctgagttgttgcag
gctcttgtcagttgcttagacagcaatgatcttagtcatatggaaggtgctatggatgcg
ttatccaagatttgcgaggatattcctcaagagcttgatggagatatacctggtttagct
gaacgacctatcaacatatttctccctagattgtttaagcttttccagtcgccacattcc
tcactgagaaagctttccttgggttcagtgaatcaatacattatgttgatgccggcagct
ttatatgcgtctatggatcaatatcttcaaggcttgtttgttctttcaaatgacactgtc
tcagaagtgcgaaaattggtttgctcagcattcgtgcagctaattgaagtccgcccatct
ttcttagagccacatctaaagaatgtaattgagtatatgttgcaagttaacaaggacact
gatgaggaggtggctcttgaagcttgtgaattctggtctgcttattgtgaagctcagtta
cccccagagaacttaagggagtacttgccccgtctaattccggtgttattatcgaacatg
atttatgctgatgatgacgaatcactaattgatgctgaggaggatgagtctgtaccagat
cgtgaacaggatatcaaacctcgtttccattcatcacggtttcatggatcagagggtggg
gaagacgatgacgatgatattgtcaatgtctggaatttacgcaagtgcagcgctgctgct
cttgatattctctcaaatatgtttggcgacgagattcttcctacattgatgcctttagtt
cagaccaacttgtctaatagtggggatgaagcttggaaagagagggaagctgctgttttg
gctcttggtgccatagctgagggttgcatcaatggactatatccacatttgtcagagatt
gttgcatttctaatccctttattagatgacaagtttcctctcatacggagtatatcatgt
tggactctttctcgtttcagtaaattcattgttcagggtgttggacatcaaacgggttat
gagcagtttgacaaggttcttctcgggctccttagaagaatattggacactaacaagcgg
gttcaggaagctgcttgttcagcctttgctacgcttgaagaggaggctgctgaagaattg
gtacctaggttggatgtaattttgcagcacctcatgtgtgcttatggaaaatatcagagg
cggaacctcagaattgtttatgatgcaattggaactctagcagatgctgttggtgcggag
ctaaatcagcctgcttatcttgaaattctgatgccacccttgatcgcaaaatggcaacaa
ctttcaaatgcagacaaagacctatttccactgcttgagtgcttcacatctatatcacag
gcattgggtactggattttcttcatttgcggagccagtatttcagagatgcataaacatc
attcagacccaacagttggcaaaggtagatcctgctgcagctggggcccagtatgataaa
gagttcattgtatgctcggttgaccttctctcaggacttgcagaaggtcttggcagtggg
atagagagtttgatttctaaaagtaacttgatggacctacttttgcaatcttgcatggat
gagacttgtgatgtcagacaaagtgcctttgcactacttggcgaccttgctagggtttgt
cctattcatttgagacctcgtttgcctgaatttcttgatgttgcagcaaagcaactgaac
actcctaagctaaaggagactgtttcagttgcaaataatgcatgttgggcaattggagaa
ttagcagtcaaggtgcgtcaagaaatttctccagttgttatgacagttatttcatgctta
gttcccattctcaaacatgcagagggtcttaataagtcacttattgagaatagtgcaatc
acactagggaggcttgcgtgggtttgtccagatattgtgtctccgcatatcgagcatttt
atgcaatcatggtgtattgctttgtcgatgatacgtgatgatgttgaaaaagaggatgca
ttccgaggtctttgtgcagtggtcaaggcaaatccatcaggagcaattaattcacttgtt
gctatgtgcaaagctattgcaagttggcatgaaataagaagtgaagagctccataatgaa
gtttgccaggtgttacacggatataagcagatgcttgtcaatggagcatgggaccaatgt
atgtctgtgttggagccgccagtaaaggagagactatcaaaatatcaagtttag
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