Humulus lupulus (common hop): 133788387
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Entry
133788387 CDS
T11341
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133788387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hlp04121
]
133788387
Enzymes [BR:
hlp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133788387
Ubiquitin system [BR:
hlp04121
]
Ubiquitin ligases (E3)
HECT type E3
133788387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
ARM_ARMC5
Arm
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
133788387
NCBI-ProteinID:
XP_062081842
LinkDB
All DBs
Position
1:complement(19034082..19043694)
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AA seq
1901 aa
AA seq
DB search
METRSRKRAEASSAAPSSSSSGLATRSSKRTRVSASSTSNAATAPAAAAAAVVSTRSRSS
RTLNELLPSSAPMDNTNESSGSRGRDRRSKNSDKDGSDKGKEKEHEVRVRDREREREREA
ERNLGLNMESGGNGDDDDNDSEGGMNNLHQNLTFSASSALQGLLRKIGAGLDDLLPSSAM
GSASSSHQSGRLKKILSGLRADGEEGKQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLV
GLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQ
ALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAV
PLLTNLLQYHDSNVLEHASVCLTRIAEAFASSPDKLDELCNYGLVTQTASLISTSSSGGG
QSSLSTPTYTGLIRLLSTCASGSPLGSKTLLLLGISGILKDILSGSGISANSSVSPALSR
PPEQIFEIVSLANELLPPLPQGTISLPASFNIFMKAPVAKKSSAGSSGKQEDLNGNVSEV
SAREKLLNDQPELLRQFGSDLLPVLVQIYGSSVNGPVRHKCLSVIGKLMYFSPAEMIQSL
LSVTNVSSFLAGVLAWKDPHVLVPALQIAEILMEKLPGTFSKMFVREGVVHAVDQLIVAG
SPTVTAQASSAEKDNDSVTGSSRSRRYRRRGVSSNPDGNSVEDTKNSLVVGSPPSSVEIP
TVNTNIRMAVSACAKSFKDNYFQSDAGSVEVGVTDDLLLLKNLCLKLNAGVDDQKTKAKG
KSKASGSRLADCSANKEEYLIGVISEMLAELSKGDGVSTFEFIGSGAVAALLNYFSCGYF
SKERVSEANLPKLRQQALRRFKAFVAVALPFSVEGSAAPMTVLVQKLQNALSSLERFPVV
LSHSSRSSTGSARLSSGLSALSQPFKLRLCRSQGDKSLRDYSSNVVLIDPLASLAAVEEF
LWPRVQRGESGQKPSASGGNSESGTTPIGAGASSPSTSTPASTTRRATRSRATVNIGDGS
RKEPPQEKSASSSKGKGKAVLKPSQEEGRGPQTRNAARRRAAVDKDAQLKHTNGDTTSED
EELDISPVEIDEALVIEDDDISDDEDDDHDDVLRDDSLPDCMPIPDKVHDVKLGDSAEDS
STAQATSDSQSNPASGSSSRAAAVRGSDSTDHRSGSSYGSRGAMSFAAAAMAGLGSANGR
GFRGGRDRHGRPLFGSSNDPPKLIFTSGGKQLNRHLTIYQAIQRQLVLDEDDEERFTGSD
FVSSDGSRLWSDIYTITYQRADSQAERGSAGGASSITTSKSTKLASASNSSSDRMSLLDS
ILQGELPCDLEKSNSTYNILALLRVLEGLNQLAPRLRAQIISDNFAEGRVSSIENMISTG
SRVSIEEFVNNKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTA
FGLSRALYRLQQQQGADGHGSANSREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKA
VLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLNMWRSNFSVEKPSMEIDIDEQKHGKNN
NGSELGYAAGSGDLVQAPLGLFPRPWPPNADASDGSQFFKVIEYFRLVGRVMAKALQDGR
LLDLPLSTAFYKLILGQELDLHDIISFDAELGRTLQELHVLVCRKQYLESNGVSGSAIAD
LRFRGAPIEDLCLDFTLPGFPDYVLKGGDENVDINNLEEYISLVVDATVKTGIMRQLEAF
KAGFNQVFDILSLQIFTPYELDHLLCGRREMWEAETLSDHIKFDHGYTAKSPAIVNLLEI
MGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSSPSNAASNGTGPSESADD
DLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggcctcctcagctgccccttcatcttcgtct
tctggtctcgctacccgttctagcaagcgtacccgtgtatctgcctcttcgacctcgaac
gctgccacagctcctgccgccgccgcggccgccgttgtttcaacccgttcccgttcctct
aggactctcaacgagttattgccctcttctgctcccatggataataccaatgaatcatct
ggctcgcgtggccgtgatcgtcgctctaagaattctgacaaggatggttcagataaagga
aaggagaaagaacacgaggttagggttagggatagagagagagaaagggaaagggaagct
gaaagaaacctggggttgaatatggagagtggaggtaatggggacgacgatgataatgat
agtgaaggtggtatgaataatttgcaccaaaatttgactttttctgcaagtagtgcactt
caagggcttcttcggaagatcggagctgggctcgatgatctactaccatcatcggccatg
ggatcagcatcttcatcacaccagagtggtcggcttaagaagattctatctgggttgcga
gctgatggggaagaaggaaagcaagtcgaggctttgactcaactatgtgaaatgctttct
attgggaccgaggaatcgctcagcacattttccgtggattcatttgttccggtgcttgtg
ggactgcttaatcacgaaagcaatcccgatattatgcttcttgctgccagggcactcact
catctatgtgacgtgctaccctcatcctgtgctgcggtggtccattatggtgcagtctcg
tgcttttgtgcaagattactaacgatagagtatatggatttagctgaacagtctctgcaa
gctcttaaaaaaatatctcaggagcacccaactgcctgtttgcgtgctggtgctctcatg
gcagtgctttcatatctggatttcttctctacaggagttcagcgtgtggccttgtctact
gctgcaaacatgtgcaagaaacttccctctgatgcagcggattttgtgatggaagctgta
ccgctgttgacaaacctacttcaatatcatgattcaaatgtgttggagcatgcttctgtt
tgtttgactcggattgctgaagcatttgcatcctctcctgataaactagacgagctgtgt
aattacggacttgtgacacaaactgcctcgctcatatcgaccagcagttctggaggtgga
caatcatctcttagcacacctacatatacgggattaatccgacttctctccacttgtgca
agtgggtccccattggggtctaaaacattacttcttctggggatcagtggtatccttaaa
gatatactatccggttctggcatttctgctaactcttcagtttcacctgctttgagtagg
ccaccagagcagatttttgagatagttagcttggcaaatgagcttcttcccccactgccc
caaggaacaatttccctcccggctagcttcaacattttcatgaaggcacctgttgcgaag
aagtcttctgctggcagttctgggaaacaagaagatttaaatggaaatgttagcgaagtt
tcagctcgtgagaaattattgaatgatcagcctgagcttcttcggcaatttggaagtgat
ctacttccagttctagtgcagatttatggttctagtgtaaatggtcctgtccgccacaaa
tgtctttctgttatagggaaattgatgtacttcagtcctgcagagatgatccagtcccta
ttaagtgtgacaaacgtgtcaagcttcttagccggtgttttggcatggaaggatccgcat
gttttggttcctgcacttcaaattgctgaaattcttatggaaaaacttcctggaactttc
tccaagatgtttgtaagggaaggtgtggttcatgcagtggatcaacttattgtagctggt
agccccacagtcactgcccaagcatcttctgcggagaaggataatgattcagtgaccgga
tcatcacgctctaggcgttatagacgacgtggtgttagctctaatcctgatggtaattca
gtggaggatactaagaattctttagtagttggttcacctccaagttcagtggagatacca
acggttaatactaatattcgaatggcagtaagtgcttgtgctaaatcctttaaagataat
tatttccagtcggatgctggcagtgttgaggttggagtgactgatgatctcttgctttta
aagaatctttgcttgaagttgaatgccggtgttgatgaccaaaagactaaagcaaaggga
aaatccaaagcttctgggtctcgcttggcagattgttctgcaaataaggaagagtacttg
attggggtaatttctgagatgctagcagaactaagcaaaggggatggcgtgtccactttt
gagttcattggtagtggtgctgttgcagccttgctcaactatttttcttgcggatacttc
tccaaggaacgggtttcagaagctaacctaccaaagcttcgccaacaagcactgagaaga
ttcaaggcatttgttgcagttgctcttccttttagtgttgaagggagtgctgctcctatg
actgttttagttcagaagcttcagaatgctttgtcgtcattggaacgttttcctgttgtg
ctgagccattcatctagatcatccactggaagtgcacgactatcctctggacttagtgca
ttatctcagccatttaagttgcgcctttgtcgatcccaaggtgacaaatcccttcgcgat
tattcatcgaatgttgtgttgattgatccattggctagcttagctgctgtagaagagttt
ctgtggcctcgagttcagcgaggtgaatctggtcagaagccttcagcatctggtgggaac
tcagaatctggtactacacccataggagctggtgcttcatctccatctacttctactcct
gcttccaccactcgtcgggccactcgctctagagcaactgtcaatataggtgatggttct
agaaaggaaccaccgcaagagaagagtgcaagctcatcaaaaggaaagggtaaagcagtt
ttgaaaccttctcaagaggagggaagaggacctcaaactagaaatgctgcacgtagaaga
gcagctgtagataaagatgctcaactaaaacacacaaatggggacactacttcagaggat
gaggaattggatatatcacctgttgagattgacgaggctttggtaattgaagatgatgat
atctcggatgatgaagatgatgaccatgatgatgttctcagagatgattctttacctgat
tgcatgcccattcctgacaaagttcatgatgtcaaattgggtgactcagctgaggacagc
agtacagctcaagcaacaagtgatagccagtctaaccctgcatctggctctagtagtaga
gctgctgcagttaggggctcggattccactgatcataggagtggtagttcctatggctct
aggggtgcaatgtcatttgctgctgctgccatggctggtcttggatctgctaatggtaga
ggcttcagaggaggtcgagatcgacatgggcgtcctctttttggtagttctaatgatcca
ccaaaattgatctttacttccggcgggaagcaacttaataggcatttgaccatctatcag
gctatacaacgacagcttgtgctggatgaggatgatgaggagcgttttactggcagtgat
ttcgtatcaagtgatggaagcaggctgtggagtgatatatataccattacataccagagg
gcagatagtcaagctgaaaggggttcagctggaggagcaagctctattactacatccaaa
tcaaccaaattggcatctgcttccaattctagctctgatagaatgtcgctgctggatagt
attcttcagggtgagcttccatgtgatttggagaagtctaattctacttacaatatattg
gcactactacgtgtgttggagggcttaaatcagcttgcacctcgtttgagggctcagata
atttctgacaattttgctgaagggagagtttcaagtatagaaaacatgatttctacaggt
tctcgtgtttctattgaggagtttgttaacaacaagctcactcctaaattagctcgacaa
attcaagatgctcttgcattgtgtagtggaagtcttccctcatggtgctaccaactgaca
aaggcatgcccattcttgtttccttttgaaactcgcagacagtatttttactcaactgca
tttggattatctcgtgccttgtatcgtcttcagcaacagcagggagctgatggtcatgga
tcggcaaattctagagaggtgagggttgggagattgcaacgccaaaaggttcgggtctct
cgaaaccgtattttggattctgcagcaaaagtaatggaaatgtattcaagccaaaaggct
gtgcttgaagttgaatactttggcgaagtgggcactgggctgggtcctactcttgagttc
tatactcttttgagccatgatttacaaaaggtaggactcaacatgtggaggtcaaatttt
tcagtggagaaaccttctatggaaattgatattgatgaacagaaacatggaaaaaacaac
aatggttctgaacttggttatgctgctggcagtggggaccttgtccaagctcctcttggt
ttgttccctcgtccatggcctccaaatgccgatgcttctgatgggagtcagttttttaaa
gtcattgagtacttccggctagttgggcgtgttatggccaaggctcttcaagatggacga
ctgttggaccttcctctgtccacagcattttacaaacttatacttggtcaagagcttgat
ttgcatgatattatttccttcgacgctgagttggggaggactttgcaagaattgcatgtc
cttgtgtgtcgcaaacaatatctagaatccaatggtgtcagtggtagtgccattgctgac
ttacgttttcgtggggctccaattgaagatctttgtttagatttcacacttcctggcttt
ccagattatgtgctgaaaggaggagatgaaaatgttgatattaacaacttggaagaatac
atatccttggttgttgatgcaacagtcaagactggaatcatgcggcaattggaagcattt
aaggcgggtttcaatcaggtatttgacatcttatctttacaaatattcacaccgtatgag
ttggaccatctactttgtgggcgtagagagatgtgggaggcggaaacactttctgatcac
atcaaattcgatcatggttacaccgccaagagtcctgcaattgtgaatttgcttgagatt
atgggagagttcacacctgaacagcagcgggccttctgccagtttgtcactggtgcacct
aggcttccaccgggtggtctagcagtcttaaatccgaaactcaccattgtcagaaagcat
tcctcctctccaagtaatgcagcatctaatggaacagggccttcagaatcagcagatgat
gatttacctagtgtcatgacatgtgctaattacttgaagcttcctccttactctaccaag
gaaatcatgtacaagaaactagtctatgcaatcagtgaagggcaaggatcctttgatttg
tcctga
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integrated database retrieval system
