Humulus lupulus (common hop): 133788681
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Entry
133788681 CDS
T11341
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133788681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133788681
03110 Chaperones and folding catalysts [BR:
hlp03110
]
133788681
03029 Mitochondrial biogenesis [BR:
hlp03029
]
133788681
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hlp04147
]
133788681
Enzymes [BR:
hlp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
133788681
Messenger RNA biogenesis [BR:
hlp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
133788681
Chaperones and folding catalysts [BR:
hlp03110
]
Heat shock proteins
HSP60 / Chaperonin
133788681
Mitochondrial biogenesis [BR:
hlp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
133788681
Exosome [BR:
hlp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133788681
Exosomal proteins of other body fluids (saliva and urine)
133788681
Exosomal proteins of breast cancer cells
133788681
Exosomal proteins of colorectal cancer cells
133788681
Exosomal proteins of bladder cancer cells
133788681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Mito_fiss_Elm1
DUF7902
Motif
Other DBs
NCBI-GeneID:
133788681
NCBI-ProteinID:
XP_062082214
LinkDB
All DBs
Position
7:complement(143969076..143972541)
Genome browser
AA seq
586 aa
AA seq
DB search
MASTNALSSASIFCSPVKQGLRRRVSQQQSSRLNYKQSSGRFVVKANAKEIAFDQHSRAA
LQAGIDKLADAVGLTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELPDAMENAGAALIRE
VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLIVELEKKAR
PVKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID
RGYISPQFVTNPEKLIAEFENARVLVTDQKITAIKDIIPLLEKTTQLRSPLLIIAEDVSG
EALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIENTSVEQ
LGLARKVTITKDSTTLIADAASKDELQARVAQLKKELAETDSVYDSEKLAERIAKLSGGV
AVIKVGAATESELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDSVPAIKEQLEDA
DERLGADIVQKALLAPASLIAQNAGVEGEVVVEKIKSSEWEQGYNAMTDKYENLVDAGVI
DPAKVTRCALQNSASVAGMVLTTQAIVVEKAKPKAPMGAPSQGLTV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgactaatgctctttcttcggcgtccattttctgctctcccgtgaagcagggc
ttgaggaggagggttagccagcagcagagtagtaggctgaactacaagcaatctagcggc
cgatttgttgttaaagccaatgcgaaggagatagcatttgaccagcactcgagggctgca
cttcaggcaggcattgataaacttgctgacgctgttggccttactcttggtcctaggggg
aggaatgttgttttggatgagtatggtagtccgaaagtggttaatgatggagtaacaata
gctcgcgctattgagctacctgatgctatggaaaatgctggtgcagctctcattcgtgag
gttgctagtaaaactaatgactctgctggtgatggaacaaccactgcatcagttcttgca
agggaaataattaagcttgggcttttgagtgttacctctggcgcaaatcccgtgtccctt
aaaagagggattgacaaaactgtgcaaggtttgatagttgagctggagaagaaggctaga
cctgttaaaggtcgtgatgatatcaaagctgttgctaccatttctgctgggaatgacgaa
cttatcggaacaatgattgctgatgcaattgacaaggttggccctgatggtgttttgtct
attgagtcatcatcttcatttgaaacaactgttgaagttgaagaaggcatggagattgac
cgaggttatatatcccctcagttcgttactaacccagagaaattgattgctgaatttgaa
aatgcaagagtcttggtgactgatcagaagattacagctattaaggacataattcctttg
ttggagaaaaccactcaattgagatcccctttgcttataattgctgaggatgtctctggg
gaggctctggcgactcttgtcgtgaacaagttgcgtggcataatcaatgttgctgccatc
aaggctcctggttttggtgaacggagaaaagctcttcttcaggatattgctattttgaca
ggagccgagtttcaagccagtgatttgggtttgcttattgagaacacctcagtggagcag
cttggtttggcaagaaaggtgaccatcactaaggattccaccaccctcattgctgatgca
gcatccaaagatgagttgcaagctagggttgctcagttgaaaaaagagttggcagaaaca
gattctgtttatgactccgagaaattggctgagagaattgccaaattgtcaggaggagtt
gcagtcataaaagtgggagctgccacagagtctgagcttgaggaccgcaagcttcgtatc
gaggatgccaagaatgcaacttttgccgctatcgaggaaggaattgtacctggtggtggt
gctgctttggtacatctctctgattctgttcctgcaatcaaggagcaacttgaagatgct
gatgagcggctaggtgctgatattgtgcaaaaggcattgttagcaccagcatctttaata
gctcaaaatgctggagttgaaggtgaagtagtggtggagaaaatcaaatcaagtgaatgg
gagcaaggttacaacgcaatgactgacaagtacgagaacctggttgatgccggggttatt
gatccagctaaggttacaaggtgtgcccttcaaaactcggcttcagtcgctggaatggtg
ctgaccactcaagccattgtggtggagaaggctaaacccaaggcacccatgggtgctcct
tcacagggacttactgtgtag
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