Humulus lupulus (common hop): 133788704
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Entry
133788704 CDS
T11341
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlp03021
]
133788704
03036 Chromosome and associated proteins [BR:
hlp03036
]
133788704
Transcription machinery [BR:
hlp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
133788704
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
133788704
SLIK complex
133788704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
SWI2_SNF2
Chromo_MIT1
OAM_alpha
Motif
Other DBs
NCBI-GeneID:
133788704
NCBI-ProteinID:
XP_062082261
LinkDB
All DBs
Position
7:complement(147796115..147823511)
Genome browser
AA seq
1762 aa
AA seq
DB search
MAFFRNFSSESVSHSDLEEKTQGKTVNRIHSSVGNEDVDVTSSEKEFDINMDAPDQSEGE
LDDASRSQNEATVNDGIISVANLQPSGRRSAMAGKWGSTFWKDCQPMHSQNGSDSGQDSD
CKNVDGLEYNSSDDREQREQRLDSEDDDGPKDAMKGHQGPSDVPTDEMLSDEYYEQDGKE
QNDLMHYRGFPHSLGSNSEQQLKPAAGNKNTARSSRVLNGSENFGDGDEDDNNNDDADYE
EDEDEDDPDDADFEPDYGITSERTLKKDKNWGGAESEEEDDSDNELDMSDEDDSYYARKS
KSKQRGKGGHIVKSTRERKLYQGSGQQRRGKSSFEDDESLGEDSESDSDVGFKSTRKGSH
QRKTSGRSTFSINATGRNNEVRTSSRSVRKVSYVESDESEDADESKKKNLQKVQSSCVPE
ELEEEDSDCIEKVLWHQPKGVAEEALRSKRSTDPVLLSYLFDSEPNWNEMEFLIKWKGQS
HLHCQWKSFSELQNLSGFKKVLNYTKKVTDEVRFRKTVTREEIEVNDVSKEMDLDLIKQN
SQVERIIADRISKDSSGDVIPEYLVKWQGLSYAEATWEKDVDITFAQDAIDEYKAREAEI
SVQGKLVDPQRKKSKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEM
GLGKTVQSVSMLGFLQNAQHIHGPFLVVVPLSTLSNWAKEFRKWLPEMNIIVYVGTRASR
EVCQQYEFYNNKNVGRPIKFNALLTTYEVVLKDKAVLSKIKWCYLMVDEAHRLKNSEAQL
YTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFRSKDDFVQNYKNLSSFNENEL
ANLHTELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRG
NQVSLLNIVVELKKCCNHPFLFESADHGYGGDSRTNDSSKLERIILSSGKLVILDKLLVR
LHETKHRVLIFSQMVRMLDILAEYMSHRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFC
FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE
EDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGSYFDKNELSAILRFGAEELFKEEKN
EEESKKRLLSMDIDEILERAEKVEEKEAEGEQGNELLSAFKVANFGTTEDDGSFWSRWIK
PDAIAQAEEALVPRAARNTKSYAEAPQPERSSKRKKKESEPLERSQKRRKADYSAPAAPM
IEGASAQSRRWSCGNLSKRDALRFSRAVLKFGNESQISLITEEVGGAVAAAQTDAQIELF
NILIDGSKEAVEVGSLDPKGPLLDFFGVPVKANDILSRVQELQLLAKRISRYEDPIAQFR
ALTYLKPSNWSKGCGWNQIDDARLLLGIHYHGFGNWEKIRLDERLGLMKKIAPVELQHHE
TFLPRAPNLRDRANALLEMELAAFGGKNSSAKVGRKGSKKDRENILNVPISQSRVKKGKA
GSALIVGKMNKDRSARSQKVEPLVKEEGEMSDNEEVYEKFKEEKWMEWCEDVMVDQMKTL
GRLQRLQTTSANLPKDKVLSKIRNYLQLLGRKIDQIVIEHEEEPYRQDRMTMRLWNYVST
FSNLSGERLHQIYSKLKLERGEEAGPSHANANGDSNPFIPFSRQRGYRNMENFPGSEPFL
KGMDTAKFEAWKRRRRAETESHIQVQAPPQRSLSNGNRISDPNSLGILGAAPFENRRDGN
DRPYRMRQTGLAPKQGFSSGVQ
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggcattttttaggaatttttctagtgaatcagtttcccacagtgacctggaagaaaaa
actcagggaaaaactgtaaacagaattcatagctcagtagggaatgaggatgtagatgta
acatcgagtgaaaaggaatttgatataaacatggatgcaccagatcaaagtgaaggtgaa
ctggatgatgctagtaggtcacaaaatgaggcaactgttaatgacggtataataagtgta
gcaaacttgcaaccatctgggaggagaagtgccatggctggaaaatggggttcaaccttt
tggaaggattgccaacctatgcactctcagaatggttctgattctgggcaagattctgac
tgtaaaaatgtagatggtttggaatataattcgtcagatgacagggagcagagggagcag
agattagattcagaggatgatgatgggccaaaggacgcaatgaagggtcatcaaggccct
tctgatgtccctacagatgagatgctttctgatgaatattatgagcaagatgggaaagag
cagaatgatttaatgcattatagagggtttcctcattctttggggtctaattctgagcaa
caattaaagccagctgcagggaataagaatactgcaagatcttctagagtcttgaatggc
agtgaaaattttggcgatggtgatgaagatgacaacaataatgatgatgctgattatgaa
gaggatgaagatgaagatgatcctgatgatgcagattttgaacctgattatggcattaca
agtgaacgcacattgaaaaaggataaaaattggggaggtgcagaatctgaagaagaagat
gacagtgataatgagctggatatgtctgatgaagacgattcttattatgcaaggaaatca
aaaagtaaacaacgtggtaaaggtggacatattgttaaatctaccagagaacgtaaattg
tatcagggatctggtcagcagcgaagaggtaaatcatcatttgaagatgatgagtctttg
ggggaggactctgaaagtgacagtgatgtgggtttcaaaagcacgaggaaaggttcacat
caacggaaaactagtggtcgttctactttttcgataaatgcaactggaagaaacaacgag
gtacgcacttctagtaggtctgtgcggaaggtgtcgtacgttgaaagtgacgaaagtgag
gatgccgatgaaagcaagaagaaaaatctccaaaaggtgcaatctagttgtgtaccagag
gaacttgaagaggaagatagtgattgtattgagaaagtgctgtggcatcaaccaaagggc
gtggctgaagaagctcttaggagtaaaagatcaactgatcctgttctacttagctacttg
tttgattctgagccaaattggaatgagatggaattcttgataaaatggaaaggccaatcc
catttacactgtcagtggaaatcattttctgagcttcagaatcttagtggttttaagaag
gttttgaattacactaaaaaggtaacggacgaagtcaggttcaggaagacagtcacacgt
gaggagattgaggttaatgatgtgagcaaggagatggacttggacctcatcaagcaaaat
agtcaggtggaaaggataattgcagaccgcattagtaaagacagttctggagatgtaatt
ccagagtatctagtcaaatggcaagggttatcttatgctgaagcgacatgggaaaaggat
gtagatatcacatttgcgcaagatgccattgatgagtataaggcccgtgaggctgaaatt
tctgtacaggggaaattggtagatccccagcgcaaaaagagcaaagcaagtttacggaag
cttgatgagcagcctgaatggttgaggggaggaaagctgcgtgattatcagcttgagggt
ctgaattttcttgttaatagttggcgaaatgatactaatgttattttagctgatgagatg
ggtcttggtaaaactgttcagtcagtatccatgcttgggtttttacagaatgctcaacat
atccatgggccatttcttgttgttgtaccattatccacattgtcaaactgggcaaaagaa
tttaggaagtggctacctgagatgaatattattgtatatgttggtactcgtgcaagtcga
gaggtttgtcagcagtatgaattctacaataacaaaaatgttggcaggccaataaaattt
aatgcactattgactacatatgaagtagttctgaaagataaagctgtcctttcaaagatc
aagtggtgctatctgatggttgatgaagcacacaggttaaaaaatagtgaagcacagttg
tatacaacactttcggaatttagcaccaagaacaagttgttgattactggtactccatta
cagaacagtgtggaagagttgtgggccctgcttcatttccttgatccagataagttcagg
agtaaagatgattttgttcagaattacaagaatcttagctcttttaatgagaatgagctt
gctaatcttcatacggaattaagacctcacattctccgaagagttattaaggatgtagag
aaatctttgcctccaaaaattgagcgaattcttagggttgagatgtctccacttcagaaa
cagtactataagtggatattggaacgcaacttccatgacttgaacaaaggagttcgtggg
aatcaggtttcacttttaaatattgtggttgagttgaagaagtgctgcaatcaccccttc
ctgtttgagagtgcagaccatggttatggtggcgactcaagaaccaatgatagcagtaaa
cttgagagaattattttgagcagtgggaagttagttatactcgataagctgcttgttagg
ttgcatgagacaaagcatcgtgttttaattttttcccagatggtaagaatgctggatata
ctagcagaatatatgtctcatagagggtttcaatttcaaaggctagatggcagcactaag
gctgaactgcgtcagcaagcaatggatcattttaatgcacctggtagtgatgatttctgc
ttccttctttcaactcgggcaggtggcctaggtatcaaccttgcaacagcagatacagtt
atcatatttgattcggactggaaccctcaaaatgacctacaggcaatgagtagagctcat
agaatcggccaacaagaagttgtgaacatctacagatttgtcacaagcaaaagtgttgag
gaagatatcttggagcgagctaagaaaaagatggttcttgaccacctggtgatccagaaa
ttgaatgcagaaggcagattggagaagaaagaagcaaaaaaggggagttattttgacaag
aatgagctttcagctatcttgagatttggagcagaggaactttttaaagaagagaagaat
gaagaagaaagtaagaaaaggctcttgagtatggatattgacgagattcttgaaagagca
gagaaggtggaagagaaggaagctgaaggagagcagggcaatgaattattgagtgctttt
aaggttgccaattttggcactactgaagatgatggaagtttctggagtcggtggataaag
cctgatgcaatagcccaagcggaagaagcacttgttccccgtgctgcaaggaacactaag
agttatgcagaagctccacaacctgagcgaagtagtaaacggaagaagaaagaatctgag
ccactggagagatctcagaaacggcgcaaagcagactattcagcccctgcagcacctatg
attgagggagcatctgctcaatcaagaagatggtcctgtgggaatttgtcgaagagggat
gcattacggttttctcgtgcggtcctgaaatttggaaatgagagccaaatcagcttgata
acagaggaggttggaggtgcagttgcagcagctcagactgatgcacaaattgagcttttc
aatatattgatagatggcagtaaagaagctgtagaagtaggaagtttggacccaaagggg
cccttgttggacttttttggagttcctgtgaaggctaatgatatactctcacgtgttcaa
gaacttcaacttttagctaagcgtatcagtcgttatgaagacccaattgcacaattccgc
gccttgacttacctgaaaccttcaaactggtcaaaaggatgtggttggaatcaaattgat
gatgcaagattacttttgggaatccattaccatggatttggcaattgggaaaagataaga
ttagacgaaaggcttggccttatgaagaagattgctccagtggaacttcaacatcacgaa
acttttctaccccgtgctcctaatttgagagaccgcgctaatgcactacttgaaatggaa
ctcgcagcttttggaggtaaaaattccagtgctaaagtgggtcggaaaggttctaagaag
gacagagaaaatatccttaatgtgcctatatctcagagccgagtcaagaaaggaaaagca
gggtcagctctgattgttggtaaaatgaacaaggaccgatctgcaagatcccaaaaagtt
gaacctttagttaaggaggagggtgaaatgtcagataatgaagaagtatatgagaagttt
aaggaagaaaaatggatggaatggtgtgaagatgtaatggttgatcaaatgaaaactctg
ggacgtcttcagcgattgcaaactaccagtgctaatcttccaaaggataaagtgctttca
aaaattagaaattatttacagcttcttggacggaaaatagatcaaattgttatagagcat
gaggaggagccatatagacaggatcggatgactatgcgtttgtggaactatgtgtcgacc
ttttcaaatttgtctggggagagactgcatcaaatttactctaaactaaaactagagcgg
ggggaggaggcaggtccttcccatgccaatgccaatggggattcaaatcctttcattcct
ttctcccggcaaagaggttacagaaatatggaaaacttcccaggttcagagccctttctc
aaaggcatggatacagccaaatttgaagcatggaaacgaaggagaagggcagaaactgag
agtcatatccaagttcaggccccacctcaaagatcattgagtaatgggaaccgaatatca
gaccccaactcattgggaattcttggggcagcaccatttgaaaatagacgtgatggtaat
gacaggccctataggatgcgtcaaactggattagccccaaaacaaggtttctcatcaggt
gttcagtag
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integrated database retrieval system
