KEGG   Humulus lupulus (common hop): 133788788
Entry
133788788         CDS       T11341                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hlp  Humulus lupulus (common hop)
Pathway
hlp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hlp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133788788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hlp03019]
    133788788
   03041 Spliceosome [BR:hlp03041]
    133788788
Messenger RNA biogenesis [BR:hlp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133788788
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133788788
Spliceosome [BR:hlp03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133788788
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 Utp21 Piezo_TM1-24
Other DBs
NCBI-GeneID: 133788788
NCBI-ProteinID: XP_062082369
LinkDB
Position
7:complement(166692318..166695050)
AA seq 464 aa
MARKRKSVPKEAPSSAETKPLLHPTAPELELDSQESSSSSSSSSSEEEEEQQVQKQEVEA
TDSSSEDSNNEEDSASDETSKRDALKNLLEPFGKDQLINTLKEAATSNPSIVSGIVKSVE
SDPIHRKIFVHGLTWDTTTETLLSAFKQYGAVEECNVVADKVTGRSKGYGFLLFNTRAGA
RKALKQPQKKIGNRIASCQLAIAGTLQGQSTPALSSAAASASTSSSESGGGGRKIYVSNV
GPHISPERLRAFFEAFGEIEDGPWGIDKATGKFKGFALFVYKSGEGMKKALKEPHKVFEG
FKLRCSVATECRATKNLAPVVPVSGAGETLAPNNVAIPALQVGLVAQNMNPGAVLMSQNP
ALGVLNPVLGMGLAPSFPGGVPHTLNRVGAAPTVGINGGFGVVQPNFNGMTPSVVGGYGS
QAALQGFGAYQNAQLAQPSVSAAPVAKSQPGAGLVGATTSYLRR
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggcgagaaaacgaaaatctgtccccaaggaagctccttcctcggcagagaccaaaccc
cttctacacccaacggcccccgagcttgagttggacagccaagaatcatcatcatcgtca
tcgtcgtcgtcatcagaagaagaagaagaacaacaagttcagaagcaggaagtcgaagca
acggactcttcctccgaagactccaacaatgaagaagattcagcatcagacgagacttcc
aagcgagacgccctgaagaatcttcttgaaccatttggcaaagaccaactcattaacacc
ctcaaagaagccgccacatccaacccctcaatcgtatccggtatcgtcaagtccgtcgag
tccgaccctattcaccgcaagattttcgtccacggcctcacttgggacaccaccaccgaa
accctactctccgccttcaagcaatacggtgccgtcgaggagtgcaacgtcgttgccgac
aaggtcaccggaaggtcgaagggatacggattcctcctcttcaacacacgcgccggagca
cgcaaagccctgaagcagcctcagaagaagatcggcaaccgaattgcctcgtgtcagctt
gccatcgcgggaaccctgcagggtcagtccactcctgctctttcttctgctgctgcctcg
gcgtcgacttcgtcatcagagagtggtggcggaggccgcaaaatctatgtgtcgaatgtt
gggccacatattagccccgagaggctcagggcatttttcgaagcctttggggagattgag
gacggtccatgggggatagacaaggccaccgggaaatttaaagggtttgctttgtttgtt
tacaagagtggggagggtatgaagaaggccttaaaagagcctcataaggtttttgagggg
tttaagttgaggtgctctgtggcgacggaatgccgtgccaccaagaacttagctccggta
gtgcctgtttccggggctggtgagacattggctcctaataatgttgctataccagctttg
caagttgggttggttgcccagaatatgaaccctggtgctgttcttatgagccagaatccg
gctcttggggttctgaatccagttttggggatggggttggctccatcgtttcctggtgga
gttccacataccttgaatagggttggagccgctcctactgtaggaatcaatggtgggttt
ggtgtagtacaaccgaattttaatggtatgaccccaagtgtggttggtggttatggctct
caagctgctttgcaaggatttggtgcgtatcagaatgctcagttggctcaaccttctgta
tcagcggccccagtagcaaagtctcaacctggtgctggtttagttggagccactacgtca
tacttacgacgctag

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