Humulus lupulus (common hop): 133788793
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Entry
133788793 CDS
T11341
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133788793
03036 Chromosome and associated proteins [BR:
hlp03036
]
133788793
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133788793
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133788793
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133788793
microRNA pathway
RISC loading complex
133788793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133788793
NCBI-ProteinID:
XP_062082380
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All DBs
Position
7:complement(167835974..167847556)
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AA seq
907 aa
AA seq
DB search
MSSSELDGNGTEEALPPPPPVIPPDIVPIKAESEQALDPVKKKTVRLPMARRNLGSKGQK
IPLLTNHFKVKVSNLQDQFFHYSVALFYEDGRPVDGKGVGRKVIDRVHETYKSDLGGKNF
AYDGEKSLFTVGPLPGNKLEFTVVLEDVSSDRVNGSQSPNAEGDRKRLRRQYQSKTFKVE
ISFAAKIPMQAIASALRGQETENSQEALRVLDIILRQHASRQGCLLVRQSFFHNDPKNFV
DVGGGVLGCRGFHSSFRAAQEGLSLNIDVSTTMIIQPGPVVDFLISNQGVNDPSRIDWAK
AKRTLKNLRIKVDPSYTEYKITGLSEKSCREQTFTLKQRGDSDSEPLEVTVYDYFVNQRH
INLRYSEDLPCINVGKPKRPTFFPVELCSLVSLQRYTKSLSTFQRSSLVEKSRQKPHERM
QVLSSALKRSDYDAEPMLRSCGVTISNSFTQVEGRVLPAPKLKAGNGEDFFPRNGKWNFN
NKKLAQPTKIEKWAVVNFNARCDINNLVQTLIKCGEMKGIMMKPPFEVFQEGGQFRRAPP
VVRVEKMFDEIQSKLPGAPDFLLCLLPERKNCDLYGPWKKKNLSEFGIVTQCIAPQRVND
QYITNVLLKINAKLGGLNSFLAVERNSMIPVVSKSPTLILGMDVSHGSPGQSDIPSIAAV
VSSRNWPSISRYRASVRTQSPKVEMIDSLFKPVGKEDEGIIRELLVDFFTSSAKRKPDQI
IIFRDGVSESQFNQVLNIELDQIIEACKFLDESWNPKFVVIIAQKNHHTKFFQQSNPENV
PPGTIIDNRICHPKNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQELVHSLSYVY
QRSTTAISVVAPICYAHLAAAQVGQFMKFEDSSETSSSHGGMSSAGVPPVPQLPRLKDNV
SNSMFFC
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttctgagcttgatggaaacggaacagaggaggctttgcctcctccaccccct
gttatcccaccagatattgttccaatcaaggcagaatcagaacaggcacttgacccagtt
aagaagaaaactgtccgacttccaatggccaggcgcaaccttggatctaaagggcaaaag
ataccgctgttgacaaatcatttcaaagtcaaagtcagtaatttgcaagaccagtttttc
cattacagtgttgccctcttttatgaagatggtcgccctgttgatggtaagggtgttgga
cggaaagtgattgatagggtccatgaaacttacaaatccgatttaggtggaaaaaacttt
gcctatgatggagagaagagcttgtttactgttgggcctcttccaggaaacaagcttgaa
tttactgttgtacttgaggacgtatcatctgatagagtcaatggtagtcagagccccaat
gctgagggtgaccgaaagagattgcgtcgccaataccagtccaaaacatttaaagtcgaa
attagctttgctgcaaaaattcccatgcaggctattgccagtgctctacgtggtcaagaa
actgagaactcccaagaagctctgagagtgttggatatcatcttacgacaacatgcatct
aggcagggatgcctacttgttcgccaatctttttttcataacgatccaaaaaattttgtt
gatgtggggggaggagttcttgggtgcagaggatttcattccagttttagagcagcccag
gaaggattgtctttaaacatagatgtgtctacaacgatgatcatacaacctgggccagtt
gtagattttttaatttctaaccaaggtgtgaatgatcctagtaggatagactgggcgaag
gctaaacggacgctcaagaatttgaggatcaaagttgatccctcttatactgaatacaag
attacaggactgagtgagaagtcatgcagagaacaaacgtttacattgaagcagagaggc
gatagtgacagtgaaccattggaagttactgtctatgattattttgttaatcaacgtcat
ataaatttgcgatattctgaagatcttccatgcattaatgtcgggaaacctaaacgccca
acctttttccctgttgagctctgctctttggtttcattgcagcgttacacgaagtcgctg
tcgacattccaaaggtcttcgttggttgagaaatcacgacaaaaaccacatgagaggatg
caagtgttgtctagtgctctgaagcgcagcgattatgatgctgaacccatgttacgctct
tgtggtgtaacaattagtaatagtttcacccaggtggaaggccgagttctgcctgccccc
aagttgaaagcaggtaacggggaggatttttttccccggaatggtaaatggaatttcaac
aacaagaaattagcacagccaaccaagatagaaaagtgggctgtagttaacttcaatgca
cggtgtgacataaataaccttgtgcaaactctgataaaatgtggagagatgaaaggaatt
atgatgaaacctccttttgaagtgtttcaagagggtggacagttcagacgtgccccacct
gtggttcgcgttgagaaaatgtttgatgagatacagtcaaaacttcccggggcacctgat
tttctactttgtctgcttccagagaggaaaaattgtgatctttatggcccatggaaaaag
aagaatctttctgagtttggaattgtgactcaatgcattgctcctcaaagggtcaatgat
caatacattacaaatgttcttttgaagatcaatgccaagcttggtgggttaaactctttt
ttagctgttgaacgtaattcaatgatcccagtggtctccaaaagtcctactctcattctt
ggaatggatgtatcacatggatctcctgggcagtctgacataccttcaattgcggcggtt
gttagttctaggaattggccctcaatttctcgttatagggcttctgttcgtacgcagtca
cccaaggtggaaatgattgattcgttatttaagccagttggtaaagaggatgaaggtatc
ataagggagcttcttgtggacttctttacgagttcagcaaaacgaaaacctgatcagatc
atcatttttagggatggggtcagtgaatcacagttcaaccaagtactgaacatagaactg
gatcaaatcattgaggcatgcaagtttcttgatgagagctggaatcccaagtttgtggtt
attattgctcaaaaaaatcaccatacaaagttcttccaacaatcgaaccccgaaaatgtt
cctcctggtaccattattgacaacaggatttgtcatccaaaaaacaacgacttctacctc
tgtgcacacgcaggcatgattggtactacaaggcccactcattatcatgtcctgttagat
gaagttggtttttcagctgatgatctacaagagctcgttcattctctatcatatgtttac
cagaggagtacaactgccatttctgtagttgcgcccatttgttatgcacacttggcggct
gcacaggtcggacagtttatgaagtttgaggacagttccgagacgtcctctagccatggt
gggatgtcttctgctggagttccacctgttcctcaactccccaggttgaaggataatgtg
tccaactccatgttcttttgttga
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