Humulus lupulus (common hop): 133788977
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Entry
133788977 CDS
T11341
Name
(RefSeq) uncharacterized protein LOC133788977
KO
K15200
general transcription factor 3C polypeptide 2
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlp03021
]
133788977
Transcription machinery [BR:
hlp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
133788977
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR5
WD40_WDHD1_1st
Churchill
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-GeneID:
133788977
NCBI-ProteinID:
XP_062082661
LinkDB
All DBs
Position
7:complement(191129447..191135670)
Genome browser
AA seq
817 aa
AA seq
DB search
MEKEGVVESYLELSISVQSCRKCKKRSTTLKKKVEIEAEETIMEEGCQCCSRKVRVSKFD
YSVENHLNAMDRISELCGEAVKEGSGLDEYETQRLSSSITFLREWRVFNYEPRDVKFACE
AEGVTSRINLPQFSSATVPQERLHGNITSMEPKDFILYVGGSVWSLDWCPRVHENPESRV
KREFIAIAAHPPGSSYHKIGAPLSGKGLVQIWSLLNISEEEGEIPPLEKLKQGRKKSVIT
KTKPNAIKRPRGRPRKNPLIEHTTAGMDCEDQYIEPFFTQVSENASNLLTIEGVPGYTQE
AFPSENIDQQIQGNSIEDCRGSNASNDGLFEISSTSSSIPNDVALPRVVLCLAHNGRVVW
DLKWRPSNTNDPTCKYRMGFLAVLLGNGSLEVWEVPHPNTIKVLYTSLHREGTDSRFVKL
KPVFKGSILKSGGIQSIPLTVEWSTSPPHEYLLVGCHDGTVAIWKFSENVSSKDTRPLLC
FSADTAPIRSVGWAPVESDSEGANVILTVGHGGLKFWDIRDPFRPLWEIHPAPRNINSAD
WLPDPRCVILSSDDGTMRTLSLTKAAYDVPATGKPFTGTKQQGLHAYFCLSFAIWSVHVS
RETGMVAYCGADGNVLRFQLTTKAVDKDHSRNRAPHFLCGSLTEDESIVTINTVIPDTPV
PVLLKKSLNKFGDNPIALRDVLTRANQAKREDDDKMEDQPASSDQNLALCYDNDLGVESN
PEEETLALLKRQKPSKHAEEKLALVSVDNEARNSQRKEIDKSSNFEALPSKAVAMHKVRW
NMNKGSEKWLCSGGAAGIVRCQEIILSDIERKWVMKK
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaaggagtagtagaaagctatcttgaactttcgatttctgttcagtcatgt
cgaaagtgcaagaagagaagtacgacattaaagaagaaggtagagatagaggcggaggag
actatcatggaagaaggttgccaatgctgtagccgcaaggttagggtttcaaagtttgac
tactcggtggagaatcacttaaacgccatggacagaatatctgagctttgtggagaggca
gtgaaggaaggtagtggactcgacgagtacgaaactcagcgattatcttcctcaatcact
ttcttaagagaatggagggtatttaattatgagccaagagatgtaaaatttgcgtgtgaa
gccgaaggtgtcactagtagaatcaacttgccacagttttcttcagcaacagtgcctcaa
gagaggctacatggaaatattacatctatggagcccaaagactttatattatatgttgga
gggtctgtttggagtttggattggtgtccaagagtccatgagaatcctgaatctagggtt
aaacgtgagtttattgctattgctgctcatcctcctggatcttcttatcacaagataggt
gccccactttctggcaaaggacttgttcagatatggtctcttttgaatattagtgaggaa
gagggagagattcctcccctggagaagctaaaacaagggcgtaagaaaagtgtcatcacc
aagacaaaaccgaatgcaataaagaggcctagaggaagacctaggaagaacccactaata
gaacatacaactgctgggatggattgcgaagaccaatatattgaacccttcttcacccag
gtttcagagaatgcttcgaacttgctcaccattgaaggtgttcctggctatactcaagaa
gcttttccatcagaaaacattgatcaacaaatacaagggaattctatagaggattgcaga
ggtagtaatgcctcaaatgatggtctatttgaaattagctcgactagtagttcaattcca
aacgatgttgctctgccgagagttgtgttatgcctagctcacaatggaagggttgtatgg
gatttgaaatggcgaccttctaatacaaatgatcccacctgcaagtatcgaatgggcttt
cttgctgtcttattaggaaatggatctttagaagtgtgggaggttcctcaccctaatact
attaaggtactctatacttctttgcatagggaaggcaccgattctcgttttgtaaaatta
aaacctgtattcaaaggctcaattttgaaatctggtggcatacaaagcattcctcttaca
gtggaatggtcaacttcacctcctcatgaatacttgcttgttggttgccatgatgggaca
gttgccatatggaaattctcagagaatgtttcctctaaagacacaaggcctttgctttgt
ttcagtgcagatacagctcctattagatcagttggctgggccccagtggagagtgattca
gagggtgcaaatgttatattaaccgtgggacatggaggcttaaaattctgggacattcgt
gatccattccgtcctctgtgggaaattcatccagcgccaaggaatataaatagtgcggat
tggcttcctgatccaagatgtgttattttatcctctgatgatggaacaatgaggacactc
agcttaacaaaagctgcttatgatgtacctgccaccgggaaaccatttactggtacgaaa
cagcaagggttgcatgcttatttttgtttatccttcgctatctggagcgttcatgtttca
agagaaacaggtatggttgcatattgcggtgcagatggaaatgttcttcgttttcagctt
acaacaaaagcagtggacaaagatcattctcgaaaccgtgctcctcattttctgtgtggt
tcactgacagaggatgaatcgattgttacaatcaacactgttataccagacactcctgtc
cctgtacttttgaagaagtcactcaacaaattcggggataatccaattgcattgcgagac
gtcttaacaagggcaaatcaggcaaagcgagaagatgatgataagatggaagatcaacct
gcctccagtgatcaaaatttagctctttgttatgacaatgatttgggagttgaatccaat
cctgaagaagaaacattagctttgctcaagaggcagaaaccttcaaaacatgcagaagag
aagctggcgttggtgtctgtagataatgaagcaagaaactcacagagaaaagagatcgat
aaatctagtaattttgaagctctgccttcgaaagctgtagccatgcataaagtgagatgg
aacatgaataagggtagtgagaaatggttgtgctctggaggggctgctggaattgttcgt
tgtcaagagattattttatcggatattgaaagaaagtgggtcatgaaaaaataa
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