Humulus lupulus (common hop): 133790275
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Entry
133790275 CDS
T11341
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hlp03012
]
133790275
Enzymes [BR:
hlp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133790275
Translation factors [BR:
hlp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133790275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133790275
NCBI-ProteinID:
XP_062083855
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Position
7:complement(2031069..2047678)
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AA seq
1457 aa
AA seq
DB search
MAPKKKQQQQQKQKQKTTAKTQSSSSSSGGPKLHISAENENRLRRLLLNSGRTGQSAAAP
VDDSLSKTQKAKKLKTIYENLSCEGFTNDQIELALSALKEGATFEASLDWLCLNLPSNEL
PLKFSSGTFQHIDGGGSVRVLLAAQDNWAPSVEASSNIFEDEVGISVKTKGQGKDETLDS
CQPSQADWIKRYVEQQEEDDSKTWEDDLLGTEKISEPRSYDVIAKEYRDARLEAMKAKEK
GDKKSKEQAGNIIRKLKQELSALGLSVEVLASEFENEQASYAASEATNVSSAPYNQSEGE
TPGEVECDSAFVSHADEVIVEGDDMELCGSKEYSVNAALSDEPIKDKVPSEEESPDVELG
DLFSEDGPQNEGLSLEVQKLQQKEKMREMLSDKNLEKLAGIWKKGDPTKIPKAFLHQLCQ
RSAWEAPNFNKVHGKGNSFSYTVSVLRKASGRGKSRKAGGLITLQLPDEGDTFESVENAQ
NRVAAFALYRLFPDLPIHLVLTEPYASLIIQWKEGDSSINVEDTEEDRRASFVDSLLNAD
GSRSIVPTDSTDDFPPEKFHQSRIEENENSAVSVVDPVVERMNHHKEVESAYLRQEQENK
MNMHKYKDMLKTRASLPIAQLKGDILQLLKDNNVLVVCGETGSGKTTQVPQFILDDMINS
GRGGHCNIICTQPRRIAAISVAERVADERCESSPGSNGSLVGYQVRLDSARNEKTKLLFC
TTGILLRKIAGDKNLTGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSAQKSPKLKVILM
SATVDSNLFSRYFDHCPVITAQGRTHPVTTSFLEDIYESINYRLASDSPVSVRYGASGKE
KSGPVNNRRGMKNLVLQAWGDDTLLSEERVNPYYVPESYHSYSEQTQQNLKRLNEDFIDY
DLLEDLVCHIDETCSEGAILVFLPGVSEINMLVDKLAASYRFGGPSSDWILPLHSSVASA
DQKRVFLRPPENIRKVIVATNIAETSLTIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWI
SQANARQRRGRAGRVKPGICFCLYTRHRFEKLMRPFQVPEMLRTPLVELCLQIKLLSLGF
IKPFLSEALEPPKDDAMTSAISLLYEVGALEGNELLTPLGHHLAKLPVDVLIGKMMIYGG
IFGCLSPILSISAFLSHKSPFVYPKDERQNVERAKLALLTDKRDGPTDSFDVDKHSDHLL
MMVAYMKWEKILREKGFKAAHHFCSSYFLSSSVLYMIRDMRIQFGTLLADIGLINFPKNF
QVGRKRENIDIWLSDASQPFNMYSHHSSIVKAVLCAGLYPNVAATEKGIAGAALGNLKQS
ASLTSHTIWYDGRREVHIHPSSINSNWKEFRYPFLAFLEKVETNKVFLRDTTIISPYSIL
LFGGSINVQHQTGLVIIDGWLKLAAPAQIAVLFKELRLTLHSILKDLIKKPENVNVGSDK
VISSIIHLLLEEDKPPA
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaaaagaagcagcagcagcagcagaagcagaagcagaaaaccaccgccaaa
acgcaatcgtcgtcgtcgtcgtccggcggtccgaagctccacatttcggctgagaatgag
aatcggctccggagacttcttctgaattcgggccggacggggcagtctgctgcggctccg
gtggatgactcgctctccaagactcagaaggctaagaagctcaaaaccatttacgagaat
ctctcctgcgaaggcttcaccaatgatcaaattgagctcgctctctctgctctcaaggag
ggtgctacgtttgaggcttctcttgattggttgtgcttgaatttgcctagcaatgagctt
ccgttgaagttttcaagcgggacatttcagcacattgatggaggtggttctgttcgcgtc
ttgttggctgctcaggataattgggctccttctgtggaagcatcttcaaatatctttgag
gatgaagtgggaatttctgttaaaacaaaggggcagggtaaggatgagactctggattca
tgtcaaccttctcaggcagactggatcaaacgatacgtggaacaacaggaagaggatgac
tctaaaacatgggaagatgatttacttggtactgagaagatctctgaaccaaggtcctat
gatgtaattgctaaagaatatcgtgatgcacggttggaagctatgaaagccaaagaaaaa
ggtgacaagaaaagtaaggaacaggcagggaatatcatccgcaaactgaagcaagagtta
tctgcattaggcttatcagttgaagttttggcttcagagtttgagaacgaacaagcttct
tatgcagcttcggaggcaacaaatgtgagttctgctccctacaaccagtctgaaggagaa
actcctggtgaagtagaatgtgattctgcatttgtttcacatgctgatgaagtaattgtt
gaaggagatgacatggagttgtgtggttccaaagagtattctgttaatgctgctctctcg
gatgaacctattaaggataaagttccctcagaagaagagtccccagatgtagagcttggt
gatttattctcagaagatggtccccaaaatgaaggtctgtctcttgaagttcaaaaattg
cagcagaaagaaaagatgagagaaatgcttagtgacaaaaatttggagaaattagctggt
atttggaaaaagggagatcctacaaagattcctaaggcttttcttcatcagttatgtcaa
agatcagcgtgggaagccccaaacttcaataaagtgcatgggaagggaaatagtttctct
tatactgtgagtgttttgcgtaaagctagtgggaggggtaagagtagaaaagctggggga
ctcatcactcttcagcttcctgatgagggcgacacttttgagtctgttgagaatgcacaa
aatagagtggcagcttttgctctttatcgcctgtttcctgatctcccaatacaccttgta
ttaacagagccttatgcttcgttgattatccagtggaaagaaggagattcatcaatcaat
gtagaggacaccgaggaagatcgacgggcaagctttgtagattcactattgaatgctgat
ggttctagatcaattgttcctactgatagtacagatgattttcctccagaaaagtttcat
caatcccgtattgaagaaaatgaaaattcagctgtttctgttgttgatccagttgttgaa
agaatgaatcatcacaaagaagtggaaagtgcttatttgagacaagaacaggagaataaa
atgaacatgcacaagtacaaggacatgttaaaaactagagcttcacttcctattgctcag
ttaaaaggtgatatattgcagctactgaaagataataacgttcttgttgtttgtggggaa
acaggttccgggaagacaactcaggttccacaatttatcttggatgacatgattaactct
ggacgtggtgggcattgtaatatcatttgtacacaacctagaagaatagcggctatttct
gtagctgaaagagttgctgatgagcgttgtgaatcttcacctggatcaaatggttccttg
gttggttatcaagttcgtcttgatagtgcaaggaatgaaaaaacaaagcttttattttgt
acaacgggcattcttttgaggaaaattgcgggagacaaaaacttaactgggattacacat
gtcatagttgatgaagtgcatgaacggtctctattgggtgactttctacttattgttctg
aagaatctgattgagaagcaatcggcccagaagtctccaaaactgaaagttattcttatg
tctgcaactgttgattcaaatttgttttcaagatactttgatcactgccctgtgattact
gcacaaggcagaacacatcctgtaacaacttcctttctggaggatatatatgaaagtatt
aattatcggctggcttcagattctccggtgtctgtaagatatggagcatctggaaaagaa
aagagtggtccagtaaacaaccgaagaggaatgaaaaatcttgttttacaagcatggggt
gatgatacattgctttctgaagaacgtgttaatccatactatgtgccagagagttaccat
tcatatagtgagcaaactcaacaaaatttgaaaagattgaatgaagatttcattgattat
gatcttcttgaagacttggtctgtcacatagatgaaacttgcagtgagggtgcaatactt
gttttcttgcctggagtgtccgaaattaacatgttggtcgataagctagctgcttcttat
cgattcggtggaccatcttctgactggattcttccattgcattcatctgttgcgtcagct
gatcaaaagagggtgttcttaagacctcctgagaacattcgtaaggtcattgtagccaca
aatattgctgagacgagtttgacgatagatgatgtggtgtatgttattgactgtggaaag
cataaagaaaatcgttataatccacagaagaaattgtcaagcatggttgaagattggata
tctcaagcaaatgcaaggcaacgccgtggtagagctggacgtgtaaaacctggaatttgc
ttttgcttgtacacacgtcaccgttttgaaaaacttatgcgcccttttcaggttccagaa
atgcttcgaactccattagtagagctgtgtttacaaataaaattactttctttgggattc
ataaagccatttttgtctgaggctttagaacctcctaaggatgatgctatgacctcggca
atttctttgttgtatgaggtcggtgctcttgaaggaaatgagctccttactcctcttgga
catcatttggctaaacttccagttgatgtattgattgggaaaatgatgatatatggagga
atatttggttgcctatctcccattctctcaatttcggcatttctgagtcacaaatctcct
tttgtctatccaaaagatgagagacaaaatgttgaaagggctaaattggcgcttttgact
gataagcgggatggtcctactgattcatttgatgttgacaagcattctgaccatctgtta
atgatggttgcatatatgaaatgggaaaagattctacgcgagaaagggtttaaagctgca
caccatttttgcagttcttattttttaagcagttcagttttgtacatgataagagatatg
agaatacagtttggaaccttgctcgcagatattgggctcatcaattttcctaaaaatttc
caggttggacggaagagagagaacattgacatttggctttctgatgcttcacagccattc
aatatgtattcgcatcattcatcaatcgtaaaggcagtattatgtgcaggtttatacccg
aatgttgctgccactgagaaagggattgctggagcagcccttgggaaccttaaacagtct
gctagtttgactagtcacacaatttggtatgatggaagaagagaagttcacatacaccct
tcgtctatcaacagtaactggaaagaatttcgatatcccttccttgcgttccttgaaaag
gtggagaccaataaagtgttcctaagagataccacaatcatatctccatactctattttg
ctatttggtggttccattaacgtccagcatcagactggtcttgtcatcattgatggatgg
ttgaaattggcagcaccagcccaaattgctgttctattcaaggaacttcggttgactctt
cattcgattttaaaggacttgataaaaaaacctgagaatgtgaatgttggttctgacaag
gttatcagctcgatcattcatctattattggaagaagacaaacccccagcatag
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