Humulus lupulus (common hop): 133794574
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Entry
133794574 CDS
T11341
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133794574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133794574
03036 Chromosome and associated proteins [BR:
hlp03036
]
133794574
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133794574
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133794574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
DUF1570
Ribosomal_S18
Motif
Other DBs
NCBI-GeneID:
133794574
NCBI-ProteinID:
XP_062087856
LinkDB
All DBs
Position
8:complement(11852353..11866368)
Genome browser
AA seq
1062 aa
AA seq
DB search
MDVDMDASPRYFDPEDQTIRERFRRYGKRPSASSLSPHQGSSPSKFSETRLFYDGKSIHS
PTNAALILDNIKQEIESMDGHEIPEADVGFDSVRSSLKACKREDESLSDSGYNTFAEFAC
LLDPAIQGHIPIPELILQFEKCCRTFSKSIRDDSTSRHRVLEDKLMRQKAQQLLDEAASW
SLLWYLYGKGTEDIPRELILLPPTSHLEACQFVAEDHTAQLCLRIVQWLEGLASKAIDLG
YKGSHIGMYLPTSGIWRQTQKYLKKGASNSSTIHHLDFDAPTREHAHQLPDDKKQDESLL
EDLWTLLRAGRLEQACNVCRSAGQPWRAATLCPFGGRDQFPSVEALLKNGKDRTLQAIEL
ESGIGHQWHLWKWASYCASEKISLQDGGKFEAAIYAAQCSNLQRMLPICTDWESACWAMA
KSWLEVQVDMELVHLQPEGLDQFRNSGDVISGSPGHSDQAFQPSNGPENWPRQVVNQQPR
QLSDLLQKLHSGEMVHESVTRACKEQQRQIEMILMSGDILSLLDLIWSWIAPSEDDQSVF
RPHGDPEMIRFGAHLVLVLRYLLDDEMKDTSKDKIVNVGDLILHMYAMFLFSKHREDLVG
IYASQLARHRCIDLFVHMMELRLNSSVQVKYKIFQSAMQYLPFSAGDDSKGSFEEIIERV
LSRSREIKAGTNNKLSDVAEQHRLQSLQKAMVIQWLCFTPPSTITNVKDVSTKLLLQALI
HSNILFREFALISMWRVPAMPIGAHTLLSFLAEPLKQLSESTDTLENYNASENLNEFQDW
SEYYSCDATYRNWLKIEVENAEVSLLKLSLEEKQRTILAARETLNSSILLLLRKENPWLV
FTEDHNNELAEPAFLELHAIAMICLPSGECMCPDATICTTLMSALYSSVNEEIVSNRQLM
VNVFISSVDNYCIEVVLRCLAVAGDGIGPHELNDGGILGTIMAAAFKGELPRFQTGVTLE
ISRLDAWYSSKDGSLEGPAMYIVRGLCRRVCLPELILRSMQVSVSLMESGVMPESLDKLI
ELVASPDTGFLHLFSQHQLQEFLLFAREYTIYQLEFQEEEQT
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgacatggatgcttctccaagatacttcgatcccgaagaccagacaattaga
gagcgatttcgccgatacgggaagagaccctcagcgtcaagcttatcaccccaccaaggg
agttcaccttcaaaattcagcgaaacgagattgttttatgatgggaaaagtatccatagc
cccacaaatgctgcacttattctagacaatattaaacaagagattgagagcatggatggt
catgaaatcccagaagcagatgtcggttttgattcagtgcgctcttcactaaaagcttgc
aaacgagaggatgagtcgctgtctgatagtggatataatacatttgcagagttcgcatgt
ctacttgatcctgctattcaaggacatattcctattcccgaacttatactacaatttgag
aaatgctgccggactttttcgaagtcaattagggacgactccacttctcggcaccgggtt
ttggaggacaagttaatgaggcaaaaggcccagcagttgcttgatgaggctgcctcctgg
tccctcttgtggtatctttatgggaaaggaactgaagatatccccagagagctcatcctg
ttgcccccaacatcacatttggaggcttgtcagtttgtagcagaggaccatacagcacag
ttgtgcttgcggattgttcaatggctagaaggtttagcctccaaggcaattgacttagga
tacaagggatcgcatattggtatgtatcttccaacttctggtatttggcgtcagacccaa
aagtatcttaaaaaaggagcttccaattcaagcactatacatcacttagattttgatgct
ccaacacgagaacatgctcatcagctacctgatgacaagaaacaagatgaatcactttta
gaagatctctggactcttttgagagctggtagacttgaacaagcatgtaacgtttgtaga
tctgcaggacaaccttggagagctgcaactttgtgcccgtttggggggcgagatcaattt
ccttctgttgaagctctcttaaaaaatgggaaggatagaactctacaagccatcgaacta
gaaagtggtattggtcaccagtggcatctttggaaatgggcatcttattgtgcctcggag
aaaatatctcttcaagatggcgggaagtttgaagcagctatatatgcagcccaatgtagc
aacttgcaacgcatgcttcccatttgcacagactgggagtcagcatgctgggcaatggca
aagtcatggctagaagttcaggtggatatggaattggttcatctgcaaccagaaggcctg
gatcaatttagaaactctggagatgtgattagtggaagtcctggccatagtgaccaagct
tttcagccttcaaatggacctgaaaattggccacggcaagttgtgaatcagcaaccacga
caactctctgatcttctccagaagcttcattcaggggaaatggtgcatgaaagtgtgacc
agagcatgcaaggagcaacagcgtcaaattgagatgattctgatgtcaggggatatacta
agtcttttggaccttatatggtcatggatagcaccttcagaagatgatcaaagtgtattc
aggcctcatggagatcctgaaatgattcgatttggtgcacatttggttcttgttcttaga
tatttactcgatgatgaaatgaaggatacttctaaagacaaaattgtaaatgttggtgac
cttatcctacacatgtatgccatgtttctattttcaaagcaccgagaggatttggtgggc
atctatgcttcccaacttgcacgtcatcgatgcattgacttatttgtgcacatgatggaa
ctaaggttgaacagcagtgtgcaagtcaaatacaagatcttccaatctgcaatgcaatac
ttgccattttctgccggggacgattcaaaaggcagctttgaagaaataattgagagggtt
ctatcaagatctcgggaaatcaaagctggtacaaataacaagttatcagatgttgcagag
cagcatcgcctgcagagtcttcaaaaagctatggttatccaatggctttgctttactccc
ccttctacaattacaaatgtcaaagatgttagcacaaaacttcttcttcaagcattgata
catagcaacatattgttcagggagtttgccctgatttcaatgtggagggtgccagcaatg
cccataggtgcccacacattacttagttttctcgctgaacctttgaagcaactatcagaa
tctactgatacattggagaattataatgcttctgagaatctgaatgaattccaggattgg
agtgaatattattcctgtgatgcaacatatcgcaactggctcaaaattgaagtagagaat
gcagaggtttctctgctcaagctttcattggaggaaaaacaaagaactattttagcagct
agggagactctgaactcttctatattattgttattgagaaaagaaaatccatggttagtt
tttactgaagatcataacaatgaattggcggagcctgcatttctcgaattgcatgccatt
gcaatgatttgccttccttctggtgaatgcatgtgtccagatgccactatatgcactaca
ttaatgagtgccctttactcttcagttaatgaggaaattgtgtcaaatcggcaactcatg
gtaaatgtttttatatcatctgtagacaattactgtattgaggtagtgctccgttgcttg
gcagtagctggtgatggtattgggccacatgagctaaatgacgggggtattcttggtacc
atcatggctgctgctttcaaaggcgagcttcctcgatttcaaacgggggttactttggag
atttctcgattagatgcttggtattcaagtaaagatggttctttagaaggtcctgcaatg
tacattgtgcggggactctgccgtagggtctgtcttccagaactcattcttcgatcaatg
caggtctctgtgtcgctcatggagtcaggtgtcatgcctgaaagcctggataagttgatt
gaactagtggctagcccagatacaggattccttcatttgtttagtcagcaccaattgcag
gagtttttattgtttgcgagggaatacacaatatatcaattggagtttcaagaggaagaa
cagacatga
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integrated database retrieval system
