Humulus lupulus (common hop): 133795211
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Entry
133795211 CDS
T11341
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp00040
Pentose and glucuronate interconversions
hlp01100
Metabolic pathways
Module
hlp_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133795211
Enzymes [BR:
hlp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
133795211
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF4337
CR_prot_dom_plant
HOATZ-like
Med11
Motif
Other DBs
NCBI-GeneID:
133795211
NCBI-ProteinID:
XP_062088652
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Position
8:complement(29004572..29050233)
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AA seq
503 aa
AA seq
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MAATETMGIDPILNRALNEFTSAMLTLTAGRIHLGAIAEETKTSDQRHEEEFKAAKARYA
DQLAAVTAEKELEEKQKYLEKACESRDQYKESNRFNYKMGRSLELVVAVVVVCAVALLLG
SRAAAAAPVVVSTYNVVSLGGKGDGKTESSKAFLAAWGKACSSTNPAVVYVPPGRFLLKN
VVFSGQCKNKAITFRIAGTLVAPTDYRLIGNAANWILFQYVNGVTISGGILDGQGTSLWN
CKNSPKTNCPPGATTLGFSNSNNVKVLGVTSLNSQMFHIVINGCNNVKLQGVKITAPGNS
PNTDGIHVQLSTGVTILNTKIGTGDDCVSIGPGTANLWIESVTCGPGHGISIGSLGKDAT
EAGVQNVTVRTVTFRGTQNGVRIKSWGRESSGFARKIVFQHVAMVNVQNPIVIDQNYCPR
NDGCPGKVSGVKVSDVTYQDIHGTSATEVAVKFDCSAVNPCSRIQLQDVKLTFNNNNRIT
TAQASCSHAAGTASGMIQPSSCL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcagccacggagacgatgggcatcgacccgattctaaaccgagccctgaatgagttc
accagcgccatgctaaccctcaccgctggccgcatccacctgggtgccattgccgaggag
accaagacctcggaccaacggcacgaggaggaattcaaagctgccaaggctcgatacgct
gatcagctggcggcggtgactgcagaaaaggagttggaggagaagcaaaaatatttggag
aaagcctgcgagtcgagggatcaatataaggagtccaatcgctttaattataagatggga
agatccttagaattggttgttgctgttgttgtagtgtgtgcggtggccttgctgttagga
agcagagcagccgcagcagcaccagtagtggtgtcgacatacaacgtggtgagtttagga
ggcaaaggcgacgggaagacagagtccagcaaggcgttcctggcagcatggggcaaagcc
tgtagttccaccaatccggcggtggtatacgtgcccccagggaggttcttgctgaagaat
gtggtgttcagtgggcaatgcaagaacaaggctatcaccttccgcattgcaggaacactg
gtcgcaccaactgactaccggctcattggcaacgctgctaattggatcctctttcagtat
gtcaatggggttaccatttctggcggaatccttgacggtcaaggcacttctctctggaac
tgcaagaactcacccaagactaattgcccccccggagccacgacgctgggattttccaac
tcaaacaacgtaaaagtcttaggagtaacttcccttaacagccagatgttccacatcgtc
atcaacggttgcaacaacgttaaactacaaggcgtcaagatcacggcccccggaaacagc
cccaacaccgatggcatccacgttcagctctccaccggcgtcacaatcctcaacaccaag
atcggaacaggagacgactgcgtatccataggccccggcaccgccaacctttggatcgag
agcgtgacgtgtggacccggccacggaatcagcatagggagcctgggaaaggacgccacg
gaggccggcgtccagaacgtgacggtgagaacggtgacgtttagggggacccaaaacggg
gtgaggataaagtcgtgggggagggagagcagcgggttcgcgaggaagattgtgttccag
catgtggcgatggtgaacgttcagaatccaatcgtgatcgaccagaattactgcccgaga
aacgacgggtgcccggggaaggtgtcgggggtgaaagtgagcgatgtgacgtaccaagac
attcacgggacctcagcgacggaggtggcggtgaagttcgattgcagcgctgtaaatcca
tgtagcagaatccagttgcaggatgtgaagcttactttcaacaataacaatcggattact
actgcacaagcttcttgtagccacgccgccggaaccgcttctgggatgatccagccttca
agttgtttgtaa
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