Humulus lupulus (common hop): 133796347
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Entry
133796347 CDS
T11341
Name
(RefSeq) uncharacterized protein LOC133796347 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133796347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlp03009
]
133796347
Ribosome biogenesis [BR:
hlp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
133796347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_THOC3
Utp12
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_ACSF4
WD40_Prp19
WD40
WDR55
EIF3I
PQQ_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
DUF6242_C
NANM
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
Lactonase
Syd
Motif
Other DBs
NCBI-GeneID:
133796347
NCBI-ProteinID:
XP_062089804
LinkDB
All DBs
Position
8:23080047..23085831
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AA seq
626 aa
AA seq
DB search
MKHLIAAFTPDGDYLAILSSNGTVKIWSTSDGSLFSEWKQSDENPGSRFSCMACSFVGKK
RRKVRGTVLLALGSDNGDVFAVDVSSGEKKWEITGSFPGGVAGLSFTNKGRSLHVVGTNG
MVSEMNSETGTPIQEFKASKKQISALAFSSDENFLAVADDKLCVLSLEDGKKLLKFSNET
GHVQFASISDDASALVTSGSRDKHLQVWSLDKNSGTVSRGSVLSMKHTPLSFQCKDGCNG
KSSTVVLAVSKSGVAYVWHLNSLLEEEVNPIKVTCKVNEDEKALQNSESVKNGRVSIFAA
RLQSLDATKDMKALIAFGSIDHPQFSLVDISKSGQDVVINASDETTSILEDGVAKADLQP
EATVSPKKNKKTNKKRLASEADQSTVGDMVDIGPGEAADGVLVDDDINEPTMGEKLAGLN
LVENNTAKSNENDESSVIKPPSADSVHVLLKQALHADDRAILLDCLYTQDEKVIAKSISL
LNPSDVLKLLQSLISITQSRGAVLVCALPWLRSLLLHHASEIISQESSLLALNSLYQLIE
SRVSTLQSALKVSSVLEVLYTGNADEDQDETEMNVPIIYEDRDESEESEDAMETDDENSD
DADTDNDEEAPEGAFGDLSDLEGMSE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacctaattgcggctttcaccccagacggtgattaccttgccattttgtcttct
aatggaacggtgaagatttggagcacaagtgacgggagcttattctctgagtggaagcag
tcggatgaaaatcctggtagtaggttctcttgtatggcatgcagttttgttgggaaaaag
cgtagaaaagtacgcggtaccgtcttgttagctctcggctcagacaatggggatgtcttt
gctgttgatgtttcatctggagagaagaagtgggaaattactggttcctttcctggtgga
gtggctggtttatcttttacaaataaaggtcgtagtctacatgtggttggaactaatgga
atggtatctgaaatgaactcggaaactggaacccctatacaagagttcaaagcttcaaaa
aagcagatatctgctttagctttttctagtgatgagaattttttagcagtagctgatgat
aaactgtgtgttttaagtttggaagatgggaagaaacttttaaagttctctaatgagacg
ggccatgttcagtttgcttctatatctgatgatgccagtgccctagttacgtcaggctct
cgagataaacatctccaagtatggagtttggataagaatagtggtacagttagtcgtggc
tccgttctttctatgaaacatactccgttaagttttcaatgtaaagatggatgcaatgga
aaatctagtacggttgtcttggcggtctcaaagtcaggtgtagcgtatgtgtggcatttg
aattccctattagaagaggaggttaatccgatcaaagtaacatgtaaagtaaatgaagat
gaaaaggccctgcaaaacagtgaaagtgtgaagaatggtcgtgtttctatttttgctgca
agattacaaagtttagatgccaccaaagatatgaaagcgctcatagcttttgggtcaatt
gatcatccacagttcagtcttgtggatattagtaaatcagggcaggatgttgtcataaat
gcttcagatgagactacaagcattttggaagatggagttgcaaaagctgatttgcagcca
gaagcaactgtttcaccgaagaaaaataaaaaaacaaataagaagcgactggcatctgaa
gcagatcaatcaactgtaggtgatatggttgatattggtcctggagaagctgccgatgga
gtacttgttgatgacgatataaatgagccaactatgggagaaaaacttgcgggtctaaat
ctagtagaaaataatacagcaaagagcaatgaaaatgacgagtcttctgtcattaagcct
cctagtgcagactctgttcatgttctgcttaagcaagctctacatgctgatgatcgtgcc
attttgttagattgcttatatacccaagatgagaaggttatagcaaaatcaatctcactg
ttgaatccatcagatgttttgaagctattacaatctctcatatccattactcagtcaagg
ggtgcagtcttggtatgtgcacttccatggctgagaagcctacttcttcatcatgcaagt
gaaattatatcgcaggaatcttctttacttgccttaaactcgctgtatcagcttatagaa
tcaagagtttctactctccagtcagctcttaaagtgtcaagtgtcttggaagtgctttat
acagggaatgctgacgaggatcaagatgaaactgaaatgaacgtgccaattatttacgag
gacagagatgaaagtgaggagtctgaggacgccatggaaaccgatgatgagaacagcgat
gatgctgacacagacaatgacgaggaggcacccgaaggagcctttggtgatcttagtgat
cttgaaggcatgagcgagtag
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