Humulus lupulus (common hop): 133796479
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Entry
133796479 CDS
T11341
Name
(RefSeq) LOW QUALITY PROTEIN: putative cyclic nucleotide-gated ion channel 7
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133796479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hlp04040
]
133796479
Ion channels [BR:
hlp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133796479
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
133796479
NCBI-ProteinID:
XP_062089993
LinkDB
All DBs
Position
8:complement(26397656..26400482)
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AA seq
770 aa
AA seq
DB search
MFECGYKSQYIGGQREKFVRLDELDSTLSMPAPCTGMKRCKFNLDGIPLPFTGRSKKNAS
KSFRYGVKKGSDGLLTFGRSLRSGVTRAVFPEDLKVSDKTIFDPQDKSLLLWNRLFVISC
ILAVSIDPFFFYLPVFNHKSFCLGMDTKLAVTTTTLRTVVDVFFLIRMALQFRTAFIAPS
SRVFGRGELVIDPHQIAMRYLQRYFIVDFLSVLPFPQIVVWKFLQRSKGSDVLETKQMLL
CIVCLQLLPRFFRLIPLTSDLKKTAGAFAESAWAGAAYYLLWFMLSGQVXPFSSTVSRRF
YMATKLNLXPLVMISQVTGAIWYLLAVERNDTCWREACKRSGKCKIDFLYCGNKHMPGYS
DWQAISDQVLTAHCSVADTSSHFKYGIYTQAISSGIVESRTFFSKFCYCLWWGMQNLSTL
GQGLQTSTYPLEVLFSISIGIAGLILFALLIGNIQTYLQSITIRLEEMRIKRRDSEQWMH
HRLLPQELREKVRRYNQYKWLETRGVDEESIVQSLPKDLRRDIKRHLCLNLVRRVPLFAN
MDERLLDAICERLKPSLYTESTFVVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGIL
KEGDFCGEELLTWALDPKAGSNLPSSTRTVNAITEVEAFALEAEELKFVASQFRRLHSRQ
VQHTFRFYSQQWRTWAAIFIQAAWRRYARRKMAEKRRKEEEEEEYDCSEEDDERTLVNRS
MSSSRLRATILASRFAANALRGRRIRSESTRGLVNLQKPPEPDFSAYDAD
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatgtggatacaagtctcagtacattggtggccagagagagaaatttgtaaga
ttggatgagctagactccacattgtcaatgcctgctccctgtactggaatgaagcgctgc
aaattcaatctcgacggaataccattacccttcaccggacgatccaagaaaaatgcatca
aaatcatttaggtacggagtgaagaaaggttcagatgggctcttaacatttggtagatca
ctaagaagtggagtaaccagggcagttttcccagaagatcttaaagtgtctgataaaact
atatttgatcctcaagacaagtccctcttgttatggaatagactttttgttatatcttgt
atcttagcagtttccattgatcctttctttttctaccttcctgtcttcaaccataaatca
ttttgtcttggaatggatacaaagttagctgtcacaaccaccactcttcgaactgtagtc
gacgttttcttccttattcgtatggctcttcagttcaggacagctttcatcgcgccatcc
tcacgggtttttggaagaggtgaacttgtcattgatcctcatcagatagctatgagatat
ctacaacgttatttcattgttgatttcctctctgtgcttccctttccacagattgtagtt
tggaagtttcttcagagatcaaaaggttcagatgttttggaaaccaagcaaatgttgcta
tgcattgtctgtttacagctcttaccaagattctttcggttaataccgttaacttcagac
cttaaaaagacagctggtgcttttgctgaaagtgcctgggctggtgctgcttactacttg
ctctggtttatgctctctggtcaagtancgcctttttctagcactgtatcaagaaggttt
tatatggctactaagctaaatctgtaaccacttgttatgatttcacaggtaactggggct
atctggtacttactagctgtagaaagaaacgatacatgttggagggaagcgtgtaaacgg
agtggaaaatgcaagatagattttttgtactgcggcaacaagcacatgccgggttacagt
gattggcaagccatcagtgaccaagttcttaccgctcactgttcggttgctgatacatca
tcacacttcaagtatggaatatacactcaagccatatcttctggcattgttgaatccagg
acctttttctcaaagttctgctattgtttatggtggggaatgcaaaacttgagtacactt
ggtcaggggcttcaaacaagtacataccctttagaggttttgttttccataagcataggt
atagcagggctcatcctatttgctcttctaattggaaatatacagacctatcttcagtcc
atcactattcggctcgaagaaatgaggatcaaaaggcgtgactccgagcagtggatgcat
catcgcctgctgccacaagagctcagggaaaaagttcgtagatataatcagtacaaatgg
ctggagactcgaggtgtagacgaagaaagcatagtccagagtctacctaaagatctcaga
agggacattaaacgacacctttgtttgaatttggtcagaagggttcctctttttgccaat
atggatgagagactgcttgacgccatttgtgagcgtctgaagccaagtctatacacagag
agtacctttgttgtcagagaaggtgacccagtgaacgagatgctatttattatacgtggt
cgtttagaaagtgtgactacagatggtggtaggagtggatttttcaacagaggtatactg
aaagaaggggacttttgtggagaagagcttctgacatgggcactggacccaaaagctggt
tctaatttaccttcatctactagaacagtaaatgccataactgaagtggaggcctttgcc
ttggaagcagaggagttgaagtttgttgctagtcagtttaggcgtcttcatagcagacag
gttcagcatactttccggttctactcgcagcagtggagaacttgggctgctatctttatt
caagctgcatggcgccgatatgccagaagaaaaatggctgaaaaaaggcgtaaagaagag
gaagaagaagagtatgactgtagcgaggaagacgatgaaaggactttagttaacagaagt
atgagttcttctaggcttcgtgccaccatcctcgcttcccgctttgcagcaaatgcgctt
cgtggtcgcaggattcgcagtgaaagtacccgaggattagtgaatctgcagaaaccccca
gaacctgacttttctgcttatgatgccgattaa
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