KEGG   Humulus lupulus (common hop): 133797024
Entry
133797024         CDS       T11341                                 
Name
(RefSeq) ras-related protein RHN1-like
  KO
K07887  Ras-related protein Rab-5A
Organism
hlp  Humulus lupulus (common hop)
Pathway
hlp04144  Endocytosis
hlp04145  Phagosome
hlp04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:hlp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133797024
   04145 Phagosome
    133797024
   04148 Efferocytosis
    133797024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hlp04131]
    133797024
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hlp04147]
    133797024
   04031 GTP-binding proteins [BR:hlp04031]
    133797024
Membrane trafficking [BR:hlp04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    133797024
 Endosome - Lysosome transport
    133797024
Exosome [BR:hlp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133797024
  Exosomal proteins of other body fluids (saliva and urine)
   133797024
  Exosomal proteins of colorectal cancer cells
   133797024
  Exosomal proteins of bladder cancer cells
   133797024
GTP-binding proteins [BR:hlp04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    133797024
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase ATPase Gtr1_RagA TsaE SRPRB AAA_16 MMR_HSR1 CobA_CobO_BtuR AAA_24
Other DBs
NCBI-GeneID: 133797024
NCBI-ProteinID: XP_062090764
LinkDB
Position
8:44774327..44779109
AA seq 200 aa
MARASNKNIQAKLVVLGDMGTGKTSLVLRFIKGQFNDYQESTIGAAFFTQVLSLNEATIK
FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITAMDSFVRAKKWVQELQRQGNPNLIMFL
AGNKVDLQGKREVEFEEGEQYAKENGLVFLETSAKTAQNVNELFYEIAKRLAKSSPTRPS
GMKLHRGSRERGRRLFCCSV
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcgagggcaagcaacaagaatatacaagccaaattggttgttctaggggacatggga
accggtaaaacaagtttagtattgagatttatcaaagggcagtttaatgactaccaggag
tcaacaattggagcagcattttttactcaggtgttatcattgaatgaagcaactataaag
ttcgatatatgggacactgcagggcaggaacgctaccacagtttggctcccatgtactat
cgtggtgcagctgccgcagttgtcgtatatgacatcacagcaatggattcatttgtacgg
gccaaaaaatgggtccaagaattgcaaagacaaggtaatccaaatttgataatgtttttg
gctggcaacaaggttgacttacaaggaaagagagaagtggaatttgaggaaggtgaacaa
tatgctaaagaaaatggcttggttttccttgaaacttctgccaaaactgcacagaatgta
aatgagctcttttacgaaatagcaaagagattggccaagtctagtcctacacgtcctagt
ggaatgaaattgcacagaggatccagagaaagggggagaagactgttttgctgctccgtc
tga

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