Humulus lupulus (common hop): 133797028
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Entry
133797028 CDS
T11341
Name
(RefSeq) heat stress transcription factor C-1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hlp03000
]
133797028
Transcription factors [BR:
hlp03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
133797028
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GFIT
Motif
Pfam:
HSF_DNA-bind
IFP_35_N
CC_Bre1
Ax_dynein_light
NUDE_C
Cnn_1N
DUF5320
Motif
Other DBs
NCBI-GeneID:
133797028
NCBI-ProteinID:
XP_062090768
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Position
8:44898233..44899877
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AA seq
376 aa
AA seq
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MGMEATTSNSVIAPFVMKTYQMVNDPMTDSLISWGHANNSFIVVEPLDFSQKILPAFFKH
NNFSSFVRQLNTYGFRKVDPDRWEFANECFLRGQKHLLKNITRKKHCNSGSSSSSGNRGV
PPHTFSASKQLDSTELDDEEIVMEIARLKQEQRTLEEELQGMTKRLETTERRPQQMMAFL
YKVVEDPDILPRIMNQNKHHLTEKKRRLAISSATSSNSSGGGGTAPTTAAGTSTNNSLKT
EDEDEVVASEAGFELESFYHFNQSSSSSPENPPSRWGDQRADRFISHDGYYNGFPTINPN
SMSAVSSGRVADSMSVMTSSSMPAPARFVSGYGNGSSSNSNSGQIGYFTGVVAGMESSNP
DPAPPPYPFSLFGGGF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggtatggaggcgacgacgagcaacagcgtcatcgcaccgttcgttatgaagacttat
cagatggtcaatgatccgatgacggacagtctgatttcatggggtcacgccaataacagc
ttcatcgtcgtcgagcctttagatttctctcagaaaattttgcctgcttttttcaagcac
aacaatttttccagcttcgttcgccagctcaatacttacgggtttcgaaaggtcgaccca
gatagatgggaattcgcaaacgagtgctttcttcgaggccaaaagcatttacttaagaat
atcacgagaaaaaagcactgtaacagtggcagtagtagcagcagcggcaaccggggagta
cctccccacactttctcggcgtccaaacaactggactcgacagagctggacgatgaagag
atagtgatggagattgctaggcttaagcaagaacagagaactttagaggaagagcttcag
gggatgacaaagcggcttgaaaccactgaaaggagaccgcagcagatgatggccttcctc
tataaggtcgttgaggaccctgatattctccctcgtataatgaaccagaacaaacatcac
ctcaccgagaagaaaagacgcctcgccatatcctctgccacttcttctaattcttccgga
ggcggtggcaccgcccccaccactgccgccgggacgagcactaataactcgctcaagacc
gaggacgaagacgaggtcgttgcgagtgaagcgggttttgaattggagagtttttaccat
tttaatcagtcttcttcgtcatcaccagagaatccgccgtcgagatggggggaccagcga
gctgaccggtttatttctcatgacggttattataatggttttcccacaattaatccaaac
tcgatgtcagcggtttcttcgggtcgggtagcggactccatgtcggtgatgacgtcatca
tcaatgccggcgccggcgagatttgtttctggatatgggaatggtagtagtagcaatagc
aatagtgggcaaataggttactttacaggagtagtggctgggatggaatccagtaatcct
gatccagctccaccgccttatccattttcattgtttggaggtggtttttaa
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