Humulus lupulus (common hop): 133797338
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Entry
133797338 CDS
T11341
Name
(RefSeq) uncharacterized protein LOC133797338
KO
K14794
ribosomal RNA-processing protein 12
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlp03009
]
133797338
Ribosome biogenesis [BR:
hlp03009
]
Eukaryotic type
90S particles
Other 90S particles
133797338
Pre-60S particles
Other pre-60S particles
133797338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
MMS19_N
PSMA-like_N
Motif
Other DBs
NCBI-GeneID:
133797338
NCBI-ProteinID:
XP_062091199
LinkDB
All DBs
Position
8:complement(56419560..56428470)
Genome browser
AA seq
1286 aa
AA seq
DB search
MEGIELEEGLARPFDEPVDDGDFCNSILTRFSDSTQEEHQRLCAVIGAMSQELKDQNMPS
SPVAYFGATWSSLDRLLSEPNPPSHVVESLLTIFSLLLPRVPVAVVRKKGELISGPMVRV
LQLSSSTLGAIIAGLKCITHYLIIKEASNWSDVSQLYGILLNFVTDSRPKVRRQVQLCLR
HVLENFRGKSLGAQASEGLSVLFKRFLLFAMDSNPNSSDGPKGALEVLHVLDALKDCLPL
MSTKYTTEILEHLKPLLAVHQPILTKRITDCLLLLCLNPDSEVSSKTLLDVLCSLALSVT
SNQNSVDAMTFTARLLDAGMVKVYSCNRQLCIVKLPVVFNALRDILASEHEEATHAAVTT
LKNLIHKCIDESLINEGVDEIKVMSLSMVSRKSGPTIIEKVCSTIESLLGYHYFAVWDLS
FQVISSLFDKLGFDSSYLMRGILKSLADMQKLPDEDFPFRKQLHECLGTALGAMGPQTFL
GLLPLNLEAEDLTEVNVWLFPILKQYTIGAHLSFFMEILDMIRQMKIKSEKLELQGRVYS
SRGVDALVYSLWSLLPSFCNYPFDTAQSFKDLVKDLCSALNEETDIRGIICSSLQSLILQ
NKKILDNKNDESDLNDSELGARQHVMSYYTPHVVADNLSALKESARELLPVLSTVFLKSS
KDDGGSLQSAIGEFASISDKGVVSRLFKNTMHKLLKVTQNAGKTESSKKSDTMAIDEPSD
ESSPSAMRGKLLDLAASLLPGLNAEEVKLLFIAIKPALQDGEGLIQKKAYKVLSLILKTN
DVFLASKLDELLQLMIEVLPSCNFSAKRHRLDCLYFLIVYVSKVNTEQRRRDIIGSFLTE
IILALKEANKKTRNRAYDIVVEIGHACGDEDKGGKRENLNQFFNMVAGGLAGETPHMISA
AVKGLARLVYEFSDLVSTACNLLPSTFLLLRRKNREIVKANLGLLKVLVAKSKAEALQLH
LKGMVEGLLMWQDDTKTHFKAKVKLLLEMLVKKCGLDAVKAVMPEEHMKLLTNIRKIKER
KEKKLAAPSEEARSHFSKATTSRLSRWNHTKIFSDFGDEETENSDLEYMDDLTISGRQGK
ASSQLKSKASLLRSRTRGNKNLPGHLVGQIEDDEPLDLLDRQRTRSALRSTENLKRKNVS
EYEPEFDADGRMIIQEEGKPKMEKPSDPESDRKSEAGSRRSTNSKKTQKRQKTSDSGWAY
TGNEYANKKAGGDLQKKDKLEPYAYWPLDRKMMSRRPEHRASAKKGMASVVKMTKKLEGK
SASSLLASGGLKFKKSHKKSGKKKSK
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcattgagctagaggaggggcttgcgcgccctttcgacgaacccgtcgacgac
ggagacttctgcaattcgatcctcacgcgattcagtgactccacgcaagaggagcaccaa
cgcctctgcgcggtcataggcgccatgtcccaggagctcaaggaccagaacatgccatcc
tccccggtggcttacttcggcgctacgtggtcgtccctggaccgtctactatccgagccc
aatccgccgagtcacgtggtcgagtctctcctcacaattttctcgctcctccttccccga
gtccccgttgctgtcgtcaggaagaaaggggaattgatttcgggccctatggttcgtgtt
cttcagttgtcgtcgtcaacactaggtgccataatcgctgggttgaaatgcattacacat
tatttgatcatcaaagaggcctccaactggtcagacgtgtctcagttgtatggaattttg
ctgaacttcgttacggattcgcgccctaaggttagaaggcaagttcagttgtgtcttcgt
catgtattggaaaattttcgagggaaatctttgggggcacaagcaagtgaagggcttagt
gttttattcaaaaggtttcttctttttgctatggattcaaatccgaatagcagtgacggt
cctaaaggagccctggaggtcctacacgttttggacgctttgaaagattgtcttcctctt
atgtcaaccaaatacacaaccgagatacttgaacaccttaaacctcttctcgcagtgcat
caacccattttaacaaagcgcataacggattgtttgcttttgctctgcctcaatccagat
tctgaggtttcttctaagacactgcttgatgtgttgtgctcactagctctttctgtcacc
tctaatcagaactcagtggatgctatgacattcactgctcgtttgcttgatgctggaatg
gtcaaagtttattcttgtaatagacagctttgcattgttaaacttcctgtagtgttcaat
gctctcagagatatattggcttctgaacacgaagaagctacacatgcggctgtaactaca
ttaaagaatttgatacataaatgtatcgatgaaagcttgataaacgagggcgtggatgaa
attaaagtgatgagtttaagtatggtttccaggaagtctgggccaaccatcattgaaaaa
gtttgttcaactatagaaagcttacttggatatcattactttgctgtttgggacctttca
tttcaagttatttcatcactgtttgataagttaggttttgattcttcttatcttatgagg
ggaatcctcaagagtttggcagatatgcagaagttgccagatgaagatttccctttcagg
aaacagctccatgaatgccttggaacagcccttggtgcaatgggtcctcaaactttcttg
ggccttctacctcttaatttagaggcagaagacctcacagaggtgaatgtttggctcttt
ccaattctgaagcagtatactattggtgctcacttaagcttctttatggaaatcttggat
atgattagacagatgaaaataaaatctgaaaagcttgagctacaaggacgtgtttattct
tctaggggtgtggacgcacttgtatactctttgtggtcattgttgccctctttttgcaac
tatccttttgatactgcccaaagtttcaaggacttggtgaaagatttgtgcagtgctctt
aatgaagagactgatattcgtggaataatatgctccagtttgcagagtcttattctacaa
aataaaaaaattctggacaataagaatgatgaatctgatttgaatgactctgaacttggt
gcaagacaacatgtgatgtcttactataccccacatgttgtagcagataatttaagtgcg
ttgaaggaatctgctcgtgagttattgcctgttctatcaactgtttttctcaaatctagc
aaagatgatggaggctctttgcagtctgccataggcgagtttgcttcgatatcagataaa
ggagttgtatcaaggttatttaagaacacaatgcataagcttttgaaggtcactcaaaat
gctggaaaaacagaatcttcaaagaagtctgatacaatggcaattgatgagccatcagat
gaaagttcgccttcagctatgaggggaaaactacttgacttggctgcttcacttttacct
ggtttgaatgctgaagaggttaagcttttattcatcgcaataaagcctgcactacaggat
ggtgaaggattaatacaaaagaaggcttacaaagtcttatcacttattctcaagactaat
gatgtgttccttgcttcgaagcttgatgagttacttcaacttatgattgaagtgctgcct
tcatgcaatttttctgcaaaacgccacaggcttgattgtctgtactttttgatagtttat
gtatccaaggttaataccgagcagaggcggcgtgacatcatagggtcattcctaactgaa
ataatacttgcacttaaagaggctaataaaaaaacgagaaacagagcgtatgatattgta
gttgaaattggccatgcttgtggagatgaagataaaggagggaaaagagaaaacttgaat
cagttttttaacatggtagctggaggcttggctggggaaacccctcatatgataagtgct
gcagtgaaaggcttggctcgattagtttatgagttttctgatcttgtttcaactgcctgc
aatttgcttccatccacatttctactccttcgaagaaagaacagagaaatagtcaaagct
aatttaggtttactgaaggttctagtggctaaatcaaaagccgaggcacttcaattacat
ttaaagggcatggttgaaggcttgctgatgtggcaagatgatactaaaacacacttcaaa
gctaaggttaagcttctgttggaaatgctagtaaagaaatgtggactggatgctgtcaag
gctgtgatgcctgaagagcacatgaaactacttaccaatatacggaagatcaaggaacgg
aaggagaaaaaactggctgctccatctgaggaagctagatctcatttctcaaaggctact
acatccaggctgagcaggtggaaccataccaaaatattttctgattttggtgacgaggaa
acggaaaatagtgatttagagtacatggatgacctgacaatttctggcaggcagggaaag
gcttcctcacaactcaaatcaaaagcatctttattgcggtctagaaccagaggaaataag
aacttgcctggacatttggttggtcaaatagaagatgatgagccacttgacttgcttgat
cgacaaagaacaagatcagctcttagatcaacggaaaacctaaaacgcaaaaatgtatca
gagtatgagccagaatttgacgcggatgggcgcatgataatacaagaagaaggaaagcca
aaaatggaaaaaccctctgatcctgaatccgataggaagagtgaagcaggtagtcgtcgg
tctacaaactcaaagaagactcagaagcggcagaaaacatcagactctgggtgggcttat
acaggaaacgagtatgctaacaagaaggctggtggagatttgcagaagaaagacaagctt
gaaccatatgcatattggccacttgatcgcaagatgatgagtcgtagaccagagcaccgg
gcatctgcaaagaaagggatggctagtgtagtaaagatgacaaagaagcttgaaggcaaa
agtgcctctagtttgctggcctctgggggcttgaagtttaagaagagccataagaaaagc
ggtaagaagaagagcaagtga
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