Humulus lupulus (common hop): 133797478
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Entry
133797478 CDS
T11341
Name
(RefSeq) uncharacterized protein LOC133797478
KO
K24155
rabconnectin-3a
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133797478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hlp04131
]
133797478
Membrane trafficking [BR:
hlp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133797478
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
133797478
RAVE complex
133797478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR5
WDR55
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_IFT122_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_C
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_Aladin
ASA1
Motif
Other DBs
NCBI-GeneID:
133797478
NCBI-ProteinID:
XP_062091370
LinkDB
All DBs
Position
8:61682497..61695710
Genome browser
AA seq
2567 aa
AA seq
DB search
MRTDHTAKTIMADTHSLPSDSTIDPIQHLPLSLFRSDTIPPAPSRSDPPGSTIDWLPNFA
DLSWVAYGASNLLVISHFPSPLSPNETAIGPIFRQFFELSGDPSLAVNAVSWSPATPSIG
ELAAASENCVWVFSHDSASLKGSFCWSQNAILVQSTKVDAVSWSGSGDGIIVGGVEVVLW
KRSNKFWEIAWKFKADGPQTLVSATWSIKGPSATAAYSGKLHTEGSFNGYTSRCVSVCQS
DKKLGYVKVELRHPLPVSLIQWRPATGRNSNGNSRNSKKNVLLTYCLDGTVRLWSEIDNG
RVRKSGKDDRKSFRQSFCVAAVIEINQSINGTLGMYIFVTWATEIEGIYEGGEGTKKLIS
LDDYDCDKAGSCEWIIGFGPERLVSFWAVHCLDDVNPMRFPRVTLWKTLELQDLKVGHLH
RTDLPNSKEKIFLSKAAVLRKSLSDPPTMCSLIQLLPSNSLVWSLIYTPTPNNLEDSSLN
NHRIEDRSCRSGEYLNLDGHTGKILQVAVHPYSADVELAVSLDSNGLLLFWSLSSISNCI
LGCPTLVPPWELHGKLGTQNSCSKYTSLSWAPPILDQELVLLMGHVGGIDCFVVKICQRE
GENIECHYLCTIPFRGHGPYEEGPTNIFSIHLPSIKHDILQSHKFLLLGVWMNGFQALSW
EVTMHSYDLSGSSCECDFETTNAAECNTWGFGITFSDKRYCVSLRSCSSQLPEPHSGDQV
TSFAVVCPDDLVSQISASFSDNLSSHPAYTMATGCANGYLKFWRSKLGELPTSATPWELV
GMVMAHQGPISAICLSNCGRKIATICKEPHSNIVSNLSVWESVHIAGSGAFILEDKIALD
GQVIALKWLALGNGRFLLGLCIQNQLFIYAQGCSGGQALLITGKSMKGEIWRCIACTHTL
SPISDFLWGPRATALVVHDSYLSILSQWLFINKEHQAGVDSNYLKMNCLDFASKTEDKHS
AIFTDCDFAELTVLLPKDDGKECNFVTPRKVNTKTGCESSSLLAARTQLEHAWDKKLGLW
NMLEIVERFGGSKEFYHPEALLMNSFTGNWKRAFSAVRHLGECLGCASEKRCSAEDSSNI
VPLIPLSNYFEGLLQKISSDKGFNWGGNTSLTTSSYQFLIGSSEFAYNLESDSSNKLFMS
SSTKSELNAFIEPLENFYKLASITIEEKTQILAIIDLLGEMTKPNSAYESLDEPGQRFWV
ALKFQQLHFFRRFGRPATMEELKIDSSLIVWAYHSDCEENLFGSVLPNEPSWPEMRNLGI
GYWFTNSAQLRTKMEKLARMQYLKKKDPKDCALLYIALNRIQVLAGLFKISKDEKDKPLI
GFLSRNFKEEKNKAAALKNAYVLMGKHQLELAIAFFLLGGDIASAVNVCAKNLGDEQLAL
VICRLIEGHGGQAEHHLITKFMLPSAIEKGDNWLASLLEWEMGNYYQSFMRMFGPLIDSA
VEKSAVLSNNISFLEPTIGLYCFTLASKNSLRNAVGDHNTAILGRWAILMTATALNRCGL
SVEALECLSSSLSVLGNMNQENTSSSSHSDILHGILKPFKNSSNWLADDVAFRLENCAKL
DLALKHLSKLTREHPSREEIVVRSAGAHMCSGKYDNHQFLELLESFRSKFYTELGQFEQK
FSLLPLSLIRNILVLLYNQGLLVVGYDLFHRYVNQEHAQDKSHAVDRICLYSLTSKPFLK
ATKETSLLFSRFVVACSITCSELKSPYMENDVSCESRSSWSNASAYYLQCLLLSSRILRA
SLRIKCGSLSQDLNTKFLTALDLIEYSVHFSYVWLLRNYKCLLLMLESLLIKNTDEHILY
EVDIANLKKLLPQIADFASQRLLDNDVGKGHHISRGLLEDQGLNTKHSIPEDEQWKIFGA
CLWQHMSRFIKHQIKKMYKLEDSYFSDLSRELSSESCSATNSDYKDKSIEEQIGLVSLTL
VKQLKATVEHISSYHIKQLALYLYLKIQHGRHVKTLVWLEDSSQSHTRVPHQNLGQDTVS
LDMMNDKEGFDILWGICVDPKMISESFAEEKICSLDFFDHKPLKGWSEIYEGGRGVDEAE
EIHSKETTSGSSSANTETGSSARQPLRNDVSFLSLWQKDTTDTQGIAPFQNPREVLKRNG
ELLEAMCINSIHQGQAAVASNRKGILFLNWKDEVSFRDQSDYVWSEADWPLNGWAGSEST
PAPTCVSPGIGLGSKKGTHLGLGGATVGVGSFARPGRDLTGGGAFGIPGYAGIGASGLGW
ETQEEFEEFVDPPPGVENISTRAFSSHPSRPLFLVGSINTHIYLWEFGKDKATATYGVLP
AANVPPPYALASISAVHFDHCGHRFATAALDGTVCTWQLEVGGRNNICPTESSLCFDRHA
SDVTYVTSSGSIIAVAGYSSNGANVVIWDTLAPPTSSRVSTTCHEGDAHSLSVFDNDIGS
GSISPLIVTGGRDGDVCIHDFRYIATGKTKRHKHLSNGGQTINPSSNSDTQTGIGDKVGE
QNLNGMLWYIPKAHSGNITKIRTIPNTSLFLTGSKDGDVKLWDAKKARMVFHWSKLHDKH
TFLQPTSRGYSGVVRAAVTDIQVVSHGFLTCGGDGSVKLIELKDQYL
NT seq
7704 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgatcataccgccaaaaccataatggcagacacacactcactaccttctgat
tccaccatcgacccgatccaacacctccctctttctctattcagatccgacaccatccct
ccggctccgtcccgttccgacccacctggatccacaatcgattggctccccaacttcgct
gacctctcctgggtcgcatatggagcttccaatctcttagtaatctcccactttccttct
ccattatcccctaatgaaaccgctattggtcccattttccggcagttcttcgagctctcc
ggtgacccttcgttggctgtcaacgctgtgtcgtggtctccggctacgccctccatcggc
gagctcgccgctgcttccgaaaattgtgtttgggttttctctcatgattcggcgagttta
aaaggttctttttgttggagccagaatgcaatacttgttcaatctactaaggtggatgct
gtcagttggagtggttcaggagatggtataattgtcggtggagttgaggttgttttatgg
aaaagaagtaacaagttttgggaaattgcttggaagtttaaagcagatggaccccaaact
ctggtttcagcgacatggtctatcaagggaccttctgcaactgcagcttactcaggtaaa
ctgcatactgaaggatcatttaatggttacactagcagatgtgtatcagtatgtcaaagt
gataaaaaattgggatatgtgaaagttgagctacgtcatcctttgcctgtgtctttgatt
caatggaggccagcaactggtagaaactcaaatggaaattctaggaattcaaaaaagaat
gtgctgctgacttattgcttagatggaactgttaggttgtggagtgagattgataacgga
agggtcagaaaaagtggcaaggatgatcgtaaatcctttcggcaatctttttgtgtcgct
gctgtaattgagataaaccagtcaataaatgggactttaggcatgtatatttttgtaaca
tgggcaacagaaattgagggtatatacgaaggtggtgagggaactaaaaagttaatctct
ttggatgattatgattgcgacaaggctggcagttgtgagtggatcattgggtttggtcca
gaaaggttggttagtttttgggctgtccattgtttagatgatgtcaacccaatgagattc
ccccgtgttacattgtggaaaacacttgaactacaggatctcaaagtggggcatcttcat
aggactgatctaccaaattccaaagagaaaatattcctcagtaaagccgctgttttgagg
aaaagtttgtctgatccaccaactatgtgctcattaattcagttgttacctagtaattca
ttggtctggtcacttatatatacaccaacacccaataatttagaggattcatcacttaat
aatcatagaatagaggatagatcttgtaggagtggtgagtacttaaatttagatggtcat
actggaaaaatcttacaggtagcagtgcatccttatagtgctgatgttgaactggctgtg
tccttggattctaacggattacttcttttttggtctctatcttcaatttctaattgcatt
ttgggttgtccaacattagttcctccatgggagctccatgggaaacttggaacgcagaat
tcatgttctaagtacacaagcttgagttgggctcctcctatattggatcaagagctggtt
cttcttatgggacacgttggtgggattgattgctttgttgttaagatatgtcaaagggaa
ggcgagaatatagaatgtcactacttatgtactataccttttagaggtcatggtccttat
gaggaaggtccaaccaacatattttcaattcatttgccttctattaaacatgacatctta
cagtcacataaatttttgcttttgggagtatggatgaatgggtttcaagctctatcatgg
gaagttactatgcattcctatgatttatcaggaagcagctgcgaatgtgattttgagact
acaaatgctgctgagtgcaacacgtggggttttggaattactttttctgataaaagatat
tgtgttagtttacgttcttgctcatcacaattaccagaacctcatagtggtgatcaagtt
acaagttttgctgtggtgtgtccagatgatttggtttcacaaatatctgcttcttttagt
gataatttatctagtcatcctgcatataccatggccacaggctgtgctaatggatatttg
aaattttggagaagtaagcttggtgaattaccaacctctgctacaccatgggagctcgtg
ggcatggttatggcacatcaggggcctattagcgctatatgcttaagcaactgtggtcgg
aagattgcaaccatttgcaaggaacctcattcaaatattgtcagcaatctttctgtatgg
gaatctgttcacattgcaggatcaggggctttcattttagaagataaaatagcccttgat
ggacaagttattgctttaaaatggttagccttaggtaatggtcggtttttacttggactt
tgcatccaaaatcagttgtttatatatgctcagggatgctctggtggtcaggctttgcta
atcactggaaaatcaatgaaaggggaaatttggcgctgcattgcatgtactcatacttta
tctcctattagtgacttcctttgggggccaagagcaacagctctggtggttcatgatagt
tacttgtctatactcagtcaatggttgttcataaataaagagcatcaggctggggttgat
tcgaattatctcaagatgaattgcctagattttgcaagtaaaacagaggacaaacattct
gcaatattcacagattgtgactttgctgaattgacagtattattacctaaggatgatggt
aaagaatgcaactttgtcactcctagaaaggtgaatacaaaaacgggttgtgaatccagc
agtttgttggcagcaaggacccaattggagcatgcttgggataaaaaacttggtttatgg
aacatgctagaaatagtggagaggtttggtggatctaaagaattttatcatcccgaggca
ctccttatgaacagctttacaggaaattggaagcgtgcattttcagctgtgaggcatctt
ggtgaatgtcttggttgtgcttctgagaagaggtgcagcgcagaggattctagcaatatt
gttccactaattcctctgtcaaattattttgaaggactccttcagaaaatttcatctgat
aaaggatttaactggggtggaaacacatctttaaccacatcatcttatcagtttctgata
gggtcatccgagtttgcttacaatttggagtctgattcttctaataaacttttcatgtcc
tcatcaacaaaatccgaacttaatgccttcattgaaccacttgagaatttctacaagcta
gcttcaataaccattgaagaaaaaacacaaattcttgctataatagatcttcttggtgaa
atgactaaaccaaactctgcttatgaaagtcttgatgaacctggacaaagattctgggtt
gcgttaaagtttcagcaactacattttttccgaaggtttggtagacctgcaactatggaa
gaattgaaaattgattcttccctgattgtgtgggcctatcactctgattgcgaggaaaat
ttgtttgggtctgttcttccaaatgaaccatcttggccagaaatgcgtaacttgggcatt
gggtattggtttacaaattcggcacaattgcgaacaaagatggagaaactggcaagaatg
cagtatctgaagaagaaggatcctaaggattgtgcattgttgtacatagcactgaataga
attcaagttctagctggccttttcaaaatcagcaaggatgagaaggataagcccctaatt
ggatttctttctcgcaactttaaggaagagaaaaacaaggcagctgctttgaagaatgca
tatgtcttaatggggaagcatcagctggagttagctattgctttctttctgcttggaggt
gatattgcttctgctgtcaatgtttgtgcaaagaaccttggggatgaacaactggcacta
gtaatttgtcggctgattgaagggcatggtggacaagcagagcatcacctaataacaaag
tttatgcttccatctgcaattgagaagggcgacaattggctagcaagccttctggagtgg
gaaatggggaattactatcaatcttttatgagaatgtttggtcccctaattgattctgca
gttgagaagtctgcagttttgtccaacaatatttctttcttagagccaactattggtctt
tactgttttacactagctagcaaaaatagtttgaggaatgctgttggggaccataacact
gcaatccttggtagatgggcaattctgatgacagctactgccttaaacagatgtggtctt
tctgttgaagctttggaatgcctttcatcttcgttgagcgttcttgggaatatgaatcaa
gaaaatacctccagctctagtcattctgatattctgcatggaattttaaagccttttaaa
aattcttccaattggctggcagatgatgtggcttttaggcttgagaattgtgctaaacta
gatttggctcttaaacacttgtccaaattgacaagagagcatccaagcagggaagagatt
gttgttcgatcagctggagctcatatgtgctcaggaaaatatgataatcatcaatttcta
gaactgcttgaaagctttagaagtaagttttacacagaactgggacagtttgaacagaag
ttttcgctacttccactcagtctaattagaaatattttggttttactgtacaatcaaggg
cttttggttgttggatatgatctatttcatagatatgtaaatcaagagcatgcacaagat
aaaagccatgcagttgatagaatctgtttatattcccttacgagtaagcctttcttaaag
gctacaaaagaaacctctctgttattttctcggtttgttgtcgcttgcagtataacttgt
tcagaactgaaatcaccttacatggaaaatgacgtttcttgtgaaagtagatcttcctgg
tcaaatgcttcggcttactatcttcaatgtcttttgttgtcatcacggattttaagagct
tctttgaggattaaatgtggatcactcagccaagatctcaatacaaaattccttacagct
cttgatttaatcgagtattctgtgcatttttcatatgtttggcttctaagaaactataaa
tgtctccttttgatgcttgaatctctcctgatcaagaatactgatgagcatatattgtac
gaagttgatattgcaaacctgaagaagcttctcccgcaaattgcagactttgcatctcaa
aggttattggacaacgatgtgggaaaaggtcatcatatttctagaggtttgttagaagat
caaggtttgaatacaaaacattcaattccagaagatgaacaatggaaaatttttggggcc
tgtttgtggcaacacatgtccagatttataaagcatcaaataaagaagatgtataaactt
gaagacagctatttttctgacttgtcacgtgaactttcttcagaatcatgcagtgccaca
aattcggattataaggacaagagcatagaagaacagattggattggtctcattgaccttg
gttaagcaattgaaagcaacagtggaacatatctcatcttatcatataaaacagctggca
ttatatctgtatttgaaaatacaacatgggcggcatgtaaagactcttgtttggttagaa
gattctagtcagtctcatactagggttccccatcagaatctaggtcaggatactgtcagt
ttggacatgatgaatgacaaagaaggatttgatatactgtggggcatctgtgttgatcct
aaaatgatatccgaaagttttgctgaggaaaaaatatgtagtctggatttttttgatcat
aaacctttgaaagggtggagtgaaatatatgaaggtggcagaggggtagatgaagctgag
gaaatccacagtaaagaaactacatctggaagtagctcagcaaataccgaaactgggtca
tctgctagacagccattacggaatgacgttagttttttgagtttatggcagaaagacaca
actgatacacagggtattgcaccctttcaaaaccccagagaagtgctcaagagaaacggg
gagcttttggaggcaatgtgtatcaactccattcatcaaggacaagctgctgttgctagc
aaccgaaaaggtatactatttcttaattggaaagatgaagtatctttcagagatcagtca
gactatgtctggtcagaggctgattggcctttaaatgggtgggctggttctgaatcaacc
ccagctcccacatgtgtatctcctggtattggtcttggaagcaagaaagggacacacctt
ggactgggtggagcaactgttggtgtgggctcttttgcaaggcctgggcgagacttgact
ggtggtggagcatttgggattcctggttatgctggtattggggcctctggtttaggttgg
gagactcaagaggaatttgaggagtttgtggatcctcctccaggtgtggagaatataagt
actagggctttctctagtcacccctccaggcctctctttttggttggctctatcaataca
cacatttacttgtgggagtttggtaaggacaaagctactgcaacttatggagttcttcct
gctgcaaatgtacctccaccgtatgcccttgcctcaatttctgctgtgcattttgatcat
tgtggacacagatttgctactgctgcattagatggcactgtttgtacgtggcagttggag
gtaggaggaaggaacaatatttgtccaacagaatcctcactttgctttgaccgccatgca
tcggatgttacttatgttacttcgagtggatccataattgctgtggctggatatagctcc
aatggggctaatgtggttatatgggatacattggctccacccacaagctcacgagtctcc
actacatgtcatgaaggtgatgcacactctctttcggtctttgataatgacattggaagt
ggttcaatttctccccttattgtcactggtggtagagatggtgatgtttgcattcatgat
tttcgatacattgctactggaaagactaagaggcacaaacatttaagtaatggtggacaa
acgatcaacccatcatcaaatagtgacacacagacagggattggtgacaaagttggggaa
caaaacctaaatgggatgctttggtacataccaaaggctcattcagggaatatcaccaag
ataagaacaatcccaaataccagtttattcttaacaggaagcaaagacggggatgttaaa
ctttgggatgccaaaaaagctaggatggtatttcattggtcaaaattgcatgataaacat
acgtttctgcaaccaacctctcggggttatagtggggtagttcgggctgctgtcacagat
atacaagttgtatcgcatggttttcttacatgtggtggtgacggtagtgtaaagctgatt
gagctcaaagaccaatacttgtaa
DBGET
integrated database retrieval system
