Humulus lupulus (common hop): 133798013
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Entry
133798013 CDS
T11341
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hlp03041
]
133798013
Spliceosome [BR:
hlp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133798013
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR
PPR_2
PPR_3
PPR_long
TPR_24
PPR_1
DUF4522
Motif
Other DBs
NCBI-GeneID:
133798013
NCBI-ProteinID:
XP_062092164
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All DBs
Position
1:complement(133400442..133403671)
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AA seq
824 aa
AA seq
DB search
MLLSKAPQPELSPFPLPSSSPNSLLLALPMRVSHFSSLLFLRSLALSHRRHGSCLSHRFV
RPISTSPLFCVTVPRQFPSVSSSSSTFVEQLENEPTEEEDAGGFDSFPESEPFDSDKKFS
SVDMKHLSAPELEIKELDELPEQWRRSKLAWLCKELPAHKTGTLVRILNAQKKWLTQEDT
TYLAVHCIRIRENETGFKVYKWMMQQHWYRFDFALATKLADYMGKERKFSKCREIFDDII
KQGRVPSESTFHILVVAYLSAPVQGCLEEACSIYNRMIQLGGYQPRLGLHNSLFKSIVSK
PGSSAKHYLKQAEFIFHNLVTTGFEVHKDIYAGLIWLHSYQDSIDKERITEIRKEMHQAG
IEEGREVLVSILRACSKDGDVEESEKTWSKVLSLGGAIPSQAFVYMMEIYGKIGDPTESL
SILREMKEHLGSNNAVAYHKIIEILCKAQEIELAESLMAEFMGSGLKPVMPSFIYIMNMY
YNLSFHDKVKLAFTQCLERCQPSCTVYSIYLDSLVKVGNLSKAEDIFCQMQNDGAIGVNA
RSCNTILSGYLSSGDNVKAEKIYDLMCQKKYDIESSLMEKIDFVLSLSRKNIKRPVSIKL
SKEQREILVGLLLGGLQIDSDEERKNHMIRFEFRENSVPHYLLKRRIHYLYHEWLHPSCQ
ANNGNEDVPYRFVTISHSYFGFYADQFWPKGRRTIPNLIHRWLSPCVLAYWYMYGGHRTS
SGDIVLKLKGNEDGVEKVVKSLKARSLECRVKRKGSVYWIGFLGSNSTWFWKLVEPYILE
DLKDSLRPGGETSSKTTLQIEDMSFQSSSDTVEKGSDLSDDGNI
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgagcaaagctcctcaaccagagctctctcctttccctctcccttcctctagc
cctaactctcttctccttgcccttcctatgcgcgtctctcatttctcttccctcctcttc
ctccgctctcttgccctctcccaccgccgccatgggtcctgccttagccaccgctttgtt
cgaccaatctccacttcccctctgttctgcgtcaccgtgccccgccaattcccgtcggtt
tcttcttcttccagtacatttgtcgaacagttggagaacgaaccaacggaggaagaggat
gctgggggtttcgatagtttccctgaaagtgagccatttgactccgataagaagttctcc
tcggttgatatgaagcacctttcggcgccggagctggagattaaggaactcgatgaactt
cccgagcagtggcgaaggtcgaagctggcgtggctgtgtaaggagttgccggcgcataag
acggggacgttggttcggatactgaatgcgcagaagaagtggctgactcaggaggacact
acttacttagcggtccattgtataaggattcgagagaatgaaactggattcaaggtgtac
aaatggatgatgcaacaacattggtatagatttgattttgctcttgccaccaaactagct
gattacatgggtaaggaacggaagttctcaaaatgtcgggagatattcgatgatataatc
aagcaggggcgagttcctagtgagtctacatttcacatattggtcgttgcttatcttagt
gctcccgttcaaggttgcttagaagaagcatgtagcatctacaatcgaatgattcaatta
ggaggataccagccgcgacttggcttacacaattctctattcaaatctattgttagcaaa
cctggaagctctgcaaaacattatctgaagcaagctgaatttatttttcacaatttggta
acaactgggtttgaggtacataaggatatatatgctggcctaatttggctacatagctat
caggactccattgataaagaaaggataacagagataaggaaagagatgcatcaagcaggt
attgaggagggcagagaagtgcttgtgtccatcttgagagcttgctcaaaggatggggat
gtggaggaatcagaaaaaacttggtccaaagttctcagtcttggcggtgctattccatct
caggcttttgtgtatatgatggagatctatggaaagattggagatcctacagaatcattg
agtatactcagagagatgaaggagcatttgggttcaaacaatgctgtggcatatcataaa
atcatagagattttatgtaaagctcaagaaattgaacttgcagaatccctcatggcagaa
ttcatgggaagcggtttgaagcctgttatgccatctttcatttatataatgaatatgtat
tataatttaagctttcatgacaaagtaaagttagccttcactcagtgccttgagagatgt
caacctagctgtaccgtttatagtatatacttggattctttggtcaaagttggtaaccta
agcaaagctgaggatatcttttgccagatgcagaatgacggtgctattggtgttaacgct
cggtcatgcaacaccatattgagcggatacctatcatctggtgataatgtgaaggcagag
aagatatatgacctgatgtgccaaaagaaatatgacatcgaatcgtcattgatggaaaag
attgattttgtcctcagcttgagcagaaaaaatattaaaagaccagtaagcataaagctt
agcaaggaacaacgagagatcttggtgggtctgctgctaggaggcttgcaaattgattca
gacgaagagaggaagaatcacatgatccgctttgagttcagagaaaattctgtcccgcat
tatctattgaagaggcgtatacattacctatatcatgaatggttgcatccttcgtgccag
gccaataatggtaatgaggatgtaccatatagatttgtcaccatctcacactcttatttt
ggattttatgcggaccagttttggccaaaggggcgacgcacaattccaaacttgatccat
cggtggctgtctccatgtgttcttgcatactggtatatgtatgggggacataggacctca
tctggagacattgtgttaaagctcaagggtaatgaggatggtgttgagaaggttgttaaa
agcttgaaggcaaggtccctggagtgtcgagtgaagagaaagggaagtgtatattggatt
ggtttcctgggaagcaattcaacctggttctggaaactagtagaaccgtatattttagaa
gacttgaaagactctcttagaccaggtggtgaaacctcaagcaaaactacacttcaaatt
gaagacatgagcttccagagttcatctgatactgttgaaaagggttctgatttaagtgat
gatgggaacatttag
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