Humulus lupulus (common hop): 133798605
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Entry
133798605 CDS
T11341
Name
(RefSeq) uncharacterized protein LOC133798605
KO
K19022
AP-5 complex subunit beta-1
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlp03400
]
133798605
DNA repair and recombination proteins [BR:
hlp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
133798605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
DruA
Motif
Other DBs
NCBI-GeneID:
133798605
NCBI-ProteinID:
XP_062092985
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All DBs
Position
8:complement(163078628..163083091)
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AA seq
1126 aa
AA seq
DB search
MSDKQPLKLLSAQEWESLIEDFQFGGARRGKWNAAYANIPSLLDQALSCLLRRDFSSKLS
IILFLEEFADSLFGVDDDDESNARENSLLRVIDTLRSFLQTPVDGVSVGISLKEQMMVSV
TSILISLETCSDRIPVRLLEGLVELLLIIVNRPNHGPDRQIRVVACECLRELEQAYPCLL
SEIVGHLWSLCQNERTHACQSYILLFTSVVRNIVAQKLNISILSNSVPLVPFSVPQVVLI
GFGSGKEGSAGLNFKELRRALAFLLEWPQVLTPCAMMEFLAMIMPMAVALELQASMLKVQ
FFGMIYSFDPMLCHVVLMMYSQFLDAFDGQEAEIARRLMLVSRETQHSLVFRLLALHWLL
GFSELLLKRDARKTKSLVDMNLNFYPSVFDPLALKAMKLDMLAFCSVCLDIINTESGLVG
GESTEKSMVKLFQDGLVSVSAFKWLPAESTETAVAFRTFRKVLIGASSHSDTDLSTTRTL
MDSTIFHTVQGMLVDVMLQCQRLVPVIVALIDRLLSCQKHHWLGECLLQTFDEHLSLKVK
MDYKLVTCFPMFDRIAENDTIPPRRLLELLTRFMVFLVEKHGPDTGLKSWSQGSRVLGIC
RTLLMHHKSSRLFLGLSRLLAFACLYFPDLEVRDNARIYLRMLICVPGNKLRNMLNLGEQ
HLGISPSPPSSFFNVHSPRSSHNVKTPRNISSFVHLERLFPLLVKQSWSLSLSSFSIESS
KPGYIEDIRDKEPIVEEIGNDSAIRILPEADRIDHPPEPLRVMDSKISEILGRLRRHFSC
IPDYRNMAGLKVKISCSLRFKSEPFNRVCGVDLPAGGLDSIDTLPAMYAIILNFSSSAAY
GSIPSHHIPFLLGEPPENANISDQRVSLDIVPLENGSGEDRRFRASVMIELEPREPTPGL
VDVSIETNAENGQIVRGQLQSITIGIEDMFLKAIIPPDVQEDELPSYYSELFNALWEACG
TCNTGRETFQLKGGKGITAISGTRSVKLLEIPALSLVQSVERYLASFVVSVIGEPLITLV
KDGGIIRDIIWEDKASPDDTDSRADFERGPLHLTYIDDAGEREGIVNISKRNLGSFLVLI
FLPPRFHLLLQMEVSDFSTLVRIRTDHWPCLAYIDDYLEALFFGIK
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataagcagcctttgaagcttctctcagctcaagaatgggagtccctaatcgaa
gatttccagttcggcggtgcacgccgcggaaagtggaacgcagcctatgctaacatccct
tccctcctggatcaagctctctcatgccttctcaggcgggacttctcttctaagctctcc
atcattcttttccttgaagagtttgctgactcgctcttcggcgttgacgacgatgacgag
tccaatgcccgggaaaattctctgcttcgtgttattgacactctccgttcctttctccaa
accccggtagatggagtttctgtaggaatctctcttaaagagcaaatgatggtctctgta
acttcgattttgatctcgcttgagacttgttccgatcggattcccgtgaggctcttagag
gggttggtggagttgcttttgataattgttaatagaccgaatcatgggcccgataggcag
attcgggtggtggcctgtgaatgcctccgggagttggaacaagcttacccttgtttgctc
tcggagattgttggccacttgtggagcctctgccagaacgagcgcactcacgcttgccag
agctacattctcctgttcacttctgtggttcgtaacatcgttgcccagaagctgaatatt
tccatcctgagtaattctgtgcctttggtgccgtttagtgtgccgcaggttgtgttgatt
ggttttggttcaggcaaggagggctctgccgggttaaacttcaaggagctgaggagggct
ttggcttttttgctcgagtggccgcaggttttgacgccttgtgctatgatggagttcttg
gccatgattatgccgatggcagtggctttggaattgcaggcctcgatgttaaaggtgcag
ttttttggaatgatttattcgtttgatcctatgctgtgccatgttgttttgatgatgtat
tcccaatttttagacgcttttgacgggcaggaagccgagattgcccgtcggcttatgttg
gtttctagagaaacacaacattcgttggtatttcgattgctggctcttcattggctgctg
ggtttcagtgaattgctgctgaaaagagatgctaggaaaacgaagtcacttgttgatatg
aatttaaacttctatccaagtgtctttgatccccttgctcttaaagccatgaagcttgac
atgcttgctttttgttccgtttgtcttgatatcataaatacagagagtggtttggttggg
ggtgagagcactgaaaaatcaatggtaaagttatttcaagatggtcttgtctctgtatca
gccttcaaatggttgcctgccgagagcactgaaactgcagtggcctttcgtaccttccgt
aaggtcttgattggtgcatcatctcattctgacactgatctttccaccacaagaactctg
atggattcaaccatcttccatactgtgcagggaatgctagtagatgtgatgttgcagtgt
cagagattggttccggtgattgttgctttgattgatcgcttgttgagctgtcaaaagcac
cattggttgggagagtgcctcctccagacttttgatgagcatttatctttaaaagtcaag
atggattacaagttggttacttgcttccctatgtttgatagaattgctgaaaatgataca
atccctcctcgacgattgttggaacttcttactagatttatggtgttccttgttgagaaa
catggcccagacacaggattaaaaagttggtctcaggggagtagagttcttggcatttgt
cgaacgctgctgatgcaccacaaaagctctagattgttccttgggctatctcgtcttctt
gcatttgcttgcctttatttccctgatttggaggttcgtgacaatgcaaggatctacctt
cggatgcttatctgcgtccctggaaataagctcaggaatatgcttaaccttggggaacaa
caccttggaatttcaccctctccacctagttcattttttaacgttcactctcctcggtct
agtcataatgtcaagacaccaagaaatatatcatcctttgtccacctggagcgcttgttt
cccctacttgtcaaacaatcttggtccttgtctttgtcgtctttttctattgaaagcagc
aagcctggttatatagaggacatcagggacaaggagcccatagtagaggaaattggtaac
gatagtgctatccggattttacctgaagctgataggattgatcacccacccgagccattg
cgtgtaatggattcaaagatttctgagattttaggaagattaagaaggcatttttcatgc
attcccgattatagaaatatggcagggcttaaggttaaaatatcctgtagtttgaggttt
aaatctgagccttttaaccgtgtatgtggagttgatttacctgctggtggtttggattca
atagacacccttcctgctatgtatgcaattatcctcaatttttcttcctctgcagcatat
gggtctattccgtcacatcacataccttttcttcttggtgaacctccagaaaatgctaac
atctctgaccaaagggtttcattagacattgttcctttagaaaatggctctggagaagac
agaaggtttagagcttctgtaatgattgagttggaaccaagggagccaacacctggtctg
gttgatgtttccattgaaacaaatgcagaaaatggccagattgttcgtggtcagcttcag
agtatcactataggaatagaagacatgtttctcaaggctattataccacctgatgtccag
gaagatgaactacctagctattactcagaattgttcaatgctctctgggaggcatgtggt
acgtgcaatactggaagggagacctttcaattgaagggtgggaaagggattacagccatt
agcgggacccgatcagtgaagttactcgaaatccctgctctatcattggttcagtctgtg
gagaggtacctggcttcatttgttgtgagtgtaatcggtgaaccactaatcacccttgta
aaggatgggggaattattagggacatcatttgggaagataaggcttcaccagacgatact
gactcaagggctgattttgagagaggccctcttcatcttacatatattgatgatgctggt
gaaagggagggcattgtcaacatcagtaaaagaaacttgggtagctttctggttttgata
tttcttccaccaaggtttcatctcctcctccaaatggaagtaagcgatttttcaactttg
gtgcgaattcgaactgatcactggccttgtttagcttatatagatgattatttagaggcc
ttattttttggcataaaatga
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