KEGG   Humulus lupulus (common hop): 133798705
Entry
133798705         CDS       T11341                                 
Name
(RefSeq) THO complex subunit 1 isoform X1
  KO
K12878  THO complex subunit 1
Organism
hlp  Humulus lupulus (common hop)
Pathway
hlp03013  Nucleocytoplasmic transport
hlp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hlp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133798705
  09122 Translation
   03013 Nucleocytoplasmic transport
    133798705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hlp03019]
    133798705
   03041 Spliceosome [BR:hlp03041]
    133798705
Messenger RNA biogenesis [BR:hlp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     133798705
Spliceosome [BR:hlp03041]
 Complex C
  Other components
   EJC/TREX
    133798705
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    133798705
SSDB
Motif
Pfam: efThoc1 Herpes_UL92
Other DBs
NCBI-GeneID: 133798705
NCBI-ProteinID: XP_062093129
LinkDB
Position
8:complement(177854114..177872279)
AA seq 606 aa
MEIFRRAILQPGPPETFALQTVQQVIKPQKQTKLAQDENQLLENILRTLLQELVSSAVQS
GEPIMQYGQSIDEGESTRGHIPSLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCKD
IFGYIESKQDVLGKVELFARGKLVMLRTCNQLLRRLSKATDVVFCGRILMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKDPPDGISIDFNFYKTFWSLQEHFCNPASISLVPIKWQKFL
SNLLVVLNTFEAQPLSDEEGNANNLEEEAATFSIKYLTSSKLMGLELKDPSFRRHILVQC
LVLFNYLKAPGKTEKDLPSESMKEEIKSYEEHVKKLLEMTPPKGKDFLHKVEHILEREKN
WVWWKRDGCPPFEKQPVEKKVVQDGAKKRRPRWRLGNKELSQLWKWSDQNPNALTDPQRV
QTPSIAEYWKPLAEDMDPAAGIEAEYHHKNNRVYCWKGLRFSARQDLEGFSKFTDHGVEG
VVPIELLPPDFRSKYQSKPNDRSKRAKKEEAKGTAQQGEENQIATPASENDEGIRGDLDA
STTPMDAEPETTGVTDMVSQGGSPMPDEHQKQSSDTDAGQEMGQLEADSEAEAGIIEGEV
DLDAAS
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggaaatttttaggagggccatactgcaacctgggccgcctgaaacttttgctttacaa
acagttcaacaagtcattaaacctcagaaacaaacaaagttagcgcaagatgagaatcag
ttattagaaaatattctccgaactttgcttcaggaactggtgtcttctgcagtacagtca
ggggagccaataatgcaatatgggcaatcaatagatgagggagaaagtacccggggtcat
attccgagtcttctcgacattgtattatatctttgtgaaaaggagcacattgaaggcggc
atgatattccagcttttagaagacttaactgaaatgtctacaatgaggaactgcaaagat
atctttggttatatagagagtaaacaggatgtattagggaaggttgagctctttgctcgt
ggtaaacttgtgatgttgaggacatgcaatcaacttcttcgtcgtctatcaaaggcaacc
gacgtggtcttctgtggacgaattctaatgttcctggcacatttttttccattatctgag
cgttcagctgtaaatataaaaggagtttttaacacatcaaatgaaaccaaatatgagaaa
gacccccctgatggcatttccattgatttcaacttctataagaccttttggagtttacag
gaacatttttgcaatcctgcttccataagtcttgttcctatcaagtggcagaaattcttg
tccaatttattggttgtgctgaatacatttgaagctcaacctttaagtgatgaagaggga
aacgccaataatttggaggaggaagcagcaacttttagtataaagtatcttactagcagt
aaactaatgggtttggagttaaaggacccaagttttcggcgccatattcttgtgcagtgc
cttgtactgttcaactatctgaaggccccaggtaaaactgaaaaggatttgccttctgag
agtatgaaagaggaaataaaatcatacgaggagcatgttaaaaagctgcttgagatgact
ccaccaaagggtaaagattttcttcataaagttgagcatatactcgaacgtgaaaagaat
tgggtatggtggaaacgtgatggctgtcctccatttgaaaaacaaccagtagagaagaaa
gttgtccaagatggagctaaaaaacgcaggccgaggtggagacttggaaataaagagctc
tctcaattatggaaatggtcagatcagaatccgaatgctttaactgatcctcaacgtgtt
cagactccctcaatagcagaatactggaaacctctggctgaagatatggatcctgctgct
gggatagaagctgaatatcaccataaaaacaacagggtttattgctggaaaggtctacgt
ttttcagctagacaggacttggagggattttctaaatttacagaccatggtgttgaggga
gtagtgcctatagaactcttaccacccgattttcgttccaaataccagtctaaaccaaat
gacaggtctaaacgtgctaaaaaggaagaagcaaagggtactgcacagcaaggagaagaa
aatcagattgcgactcctgctagcgagaatgatgaaggaatcaggggtgatcttgatgcc
tctacaaccccaatggatgctgaacctgaaaccactggtgtgactgacatggtgtcccaa
ggtggcagtccaatgcccgatgaacaccagaagcaaagttctgacacagatgccggtcaa
gagatgggtcagttggaagcagattctgaggcagaggcagggatcattgagggtgaggtt
gatttagatgcagcttcctga

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