Humulus lupulus (common hop): 133798705
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Entry
133798705 CDS
T11341
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03013
Nucleocytoplasmic transport
hlp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133798705
09122 Translation
03013 Nucleocytoplasmic transport
133798705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133798705
03041 Spliceosome [BR:
hlp03041
]
133798705
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133798705
Spliceosome [BR:
hlp03041
]
Complex C
Other components
EJC/TREX
133798705
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133798705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Herpes_UL92
Motif
Other DBs
NCBI-GeneID:
133798705
NCBI-ProteinID:
XP_062093129
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All DBs
Position
8:complement(177854114..177872279)
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AA seq
606 aa
AA seq
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MEIFRRAILQPGPPETFALQTVQQVIKPQKQTKLAQDENQLLENILRTLLQELVSSAVQS
GEPIMQYGQSIDEGESTRGHIPSLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMRNCKD
IFGYIESKQDVLGKVELFARGKLVMLRTCNQLLRRLSKATDVVFCGRILMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKDPPDGISIDFNFYKTFWSLQEHFCNPASISLVPIKWQKFL
SNLLVVLNTFEAQPLSDEEGNANNLEEEAATFSIKYLTSSKLMGLELKDPSFRRHILVQC
LVLFNYLKAPGKTEKDLPSESMKEEIKSYEEHVKKLLEMTPPKGKDFLHKVEHILEREKN
WVWWKRDGCPPFEKQPVEKKVVQDGAKKRRPRWRLGNKELSQLWKWSDQNPNALTDPQRV
QTPSIAEYWKPLAEDMDPAAGIEAEYHHKNNRVYCWKGLRFSARQDLEGFSKFTDHGVEG
VVPIELLPPDFRSKYQSKPNDRSKRAKKEEAKGTAQQGEENQIATPASENDEGIRGDLDA
STTPMDAEPETTGVTDMVSQGGSPMPDEHQKQSSDTDAGQEMGQLEADSEAEAGIIEGEV
DLDAAS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttttaggagggccatactgcaacctgggccgcctgaaacttttgctttacaa
acagttcaacaagtcattaaacctcagaaacaaacaaagttagcgcaagatgagaatcag
ttattagaaaatattctccgaactttgcttcaggaactggtgtcttctgcagtacagtca
ggggagccaataatgcaatatgggcaatcaatagatgagggagaaagtacccggggtcat
attccgagtcttctcgacattgtattatatctttgtgaaaaggagcacattgaaggcggc
atgatattccagcttttagaagacttaactgaaatgtctacaatgaggaactgcaaagat
atctttggttatatagagagtaaacaggatgtattagggaaggttgagctctttgctcgt
ggtaaacttgtgatgttgaggacatgcaatcaacttcttcgtcgtctatcaaaggcaacc
gacgtggtcttctgtggacgaattctaatgttcctggcacatttttttccattatctgag
cgttcagctgtaaatataaaaggagtttttaacacatcaaatgaaaccaaatatgagaaa
gacccccctgatggcatttccattgatttcaacttctataagaccttttggagtttacag
gaacatttttgcaatcctgcttccataagtcttgttcctatcaagtggcagaaattcttg
tccaatttattggttgtgctgaatacatttgaagctcaacctttaagtgatgaagaggga
aacgccaataatttggaggaggaagcagcaacttttagtataaagtatcttactagcagt
aaactaatgggtttggagttaaaggacccaagttttcggcgccatattcttgtgcagtgc
cttgtactgttcaactatctgaaggccccaggtaaaactgaaaaggatttgccttctgag
agtatgaaagaggaaataaaatcatacgaggagcatgttaaaaagctgcttgagatgact
ccaccaaagggtaaagattttcttcataaagttgagcatatactcgaacgtgaaaagaat
tgggtatggtggaaacgtgatggctgtcctccatttgaaaaacaaccagtagagaagaaa
gttgtccaagatggagctaaaaaacgcaggccgaggtggagacttggaaataaagagctc
tctcaattatggaaatggtcagatcagaatccgaatgctttaactgatcctcaacgtgtt
cagactccctcaatagcagaatactggaaacctctggctgaagatatggatcctgctgct
gggatagaagctgaatatcaccataaaaacaacagggtttattgctggaaaggtctacgt
ttttcagctagacaggacttggagggattttctaaatttacagaccatggtgttgaggga
gtagtgcctatagaactcttaccacccgattttcgttccaaataccagtctaaaccaaat
gacaggtctaaacgtgctaaaaaggaagaagcaaagggtactgcacagcaaggagaagaa
aatcagattgcgactcctgctagcgagaatgatgaaggaatcaggggtgatcttgatgcc
tctacaaccccaatggatgctgaacctgaaaccactggtgtgactgacatggtgtcccaa
ggtggcagtccaatgcccgatgaacaccagaagcaaagttctgacacagatgccggtcaa
gagatgggtcagttggaagcagattctgaggcagaggcagggatcattgagggtgaggtt
gatttagatgcagcttcctga
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