Humulus lupulus (common hop): 133800668
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Entry
133800668 CDS
T11341
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133800668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133800668
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133800668
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
133800668
NCBI-ProteinID:
XP_062094685
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All DBs
Position
9:1301462..1304597
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AA seq
252 aa
AA seq
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MAGTTTYSPSSTTHKKKPPISKIDDVDWVRPDGRGFQQCRLAFFRTGAVTSAAGSAYAEF
GNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPVRGQGSDNKEFSSMLHKALEG
AIILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVTSVSVFCLGKNL
IIDPVLEEESSQDGSLMITCMPTRYEVTQLTITGEWSTPKVNEGMQLCLDACSKLAKIMR
SCLKEAASASNE
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggctggaacaactacatactctccgtcttcgacaacccacaaaaagaaacctcccatt
tccaaaatcgacgacgtcgattgggtccgacccgatggccgaggtttccaacaatgtaga
cttgccttttttaggactggggctgtaacttctgctgcaggatctgcttatgcagagttt
gggaatacaaaagtcattgtgtctgtatttgggccaagagagagtaagaaggcaatgatg
tacagtgatattggaaggttgaactgtaatgtgagctatacaacttttgccaccccagtc
cgtggacagggatcagacaacaaggagttttcttcaatgcttcataaggctttggaaggt
gctatcattttggaaactttccctaagacaactgtcgacgtctttgcattggtgttggaa
tcgggtggcagtgatttgcctgttgtgatttcatgcgctagtgtagctctagcagatgca
gggataatgatgtatgaccttgtaacttcagtttcagtgttttgcctcggaaagaacctc
ataattgacccagttttggaagaggaaagctcccaagatggaagcttaatgataacgtgt
atgcccacgcgatacgaggtcactcagctaactataacaggggaatggtcaaccccaaaa
gttaatgagggaatgcagctatgcctggatgcttgctcaaagcttgcgaagattatgaga
tcatgcttgaaagaagctgcatccgcttccaatgaatag
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