Humulus lupulus (common hop): 133800887
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Entry
133800887 CDS
T11341
Name
(RefSeq) protein argonaute 2-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133800887
03036 Chromosome and associated proteins [BR:
hlp03036
]
133800887
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133800887
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133800887
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133800887
microRNA pathway
RISC loading complex
133800887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133800887
NCBI-ProteinID:
XP_062094972
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Position
9:complement(48476039..48489013)
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AA seq
1198 aa
AA seq
DB search
MESGGSSTSRGRARGRGSDVGGSQGRRVGGCARGEGRGSGERGRGRDADAGGARGRGRFA
DVGDSGARSRGRDVGASGAWGRGRATDAGVSADGDCGARSSGRDVGASGARGRGGDAGVG
GVGGARSRGRNSAGTSGDGGGRHAGDRYQQNQKEEEYPALSPLRPGNQTRRLSSQSGGSG
SGTGSQSSGDRGQTETLSSPSPIKFGQGFSIPVVGRGRGVWGGSGTGLKEQFRPGTSSNA
PLESETPSSGRGVGRGGGVWGSARSALKVRLPSGTSPPHSTEPETPTLGVGRGGVWGSPD
RGLKPLPSATSQPTAVESETSSLDLVISDMQKTTISSSQSQPSGNANNLVPIKRPPPNKD
GDKREKVQLFANHFLVTFDPEISIHRYDVSVFPKAGRDRSVKIPNSDLRTIIEKLLSDYP
TELPPWKKTAYDGQKILFCAEEEKRKGGIFPVEDYLTVNIVPCSNKDSSLRKLDEYLHGR
LPSSENLREVLQGLDLVMKENPARSMISSGRSFYDTRESKNTLGPDCGFYNYEGFQHSLK
PTSQGLSLCLDHSTLAMSKRVPVLEFLKKQITSFNTYNYFCSPNDFESRRKSVEEVLKGL
KVYVTHRKTKQKFVVKGLAPEIAECTKFAVVDPAGKIPDREVELLKYFKEKYGIEIKKSA
LPCLDIGRSDRRNYVPMEFCQIVEWQRCDKPKDEGMKRGNVNLMKPDIRADKIAKIARST
DGPYGGEIAKSFKIEVNTSMTTVRGRLIQPPELRLGKKGIKKRNIFQSENLDWNLVRRSL
VQGTRINNWVVLDFSSEEQKQGNKLQFTNFLPKFTRRCRELDISIAENPAYGAGSMENFS
SVETLGQFIDIQLKAARPKLEGPLQLILCVMSRKDPGYKYLKWIAETKIGVVTQCCLANR
ANKVDGNYLANLALKINAKLGGINMQVEMDCHLGILTVSEHVMFIGADVNHPGSRNTTTS
PSIAAVAASMNWPTPYRYAARVRTQECRTEKIAEFADMCLELIECYQRLNKVKPKKIIIF
RDGVSEGQFNMVLNEELSGLKEKLALQKYHPTVTLIVAQKRHQTRLFRKNSRGLMDNVLP
GTVVEETIVHPFEFDFYLCSHHGSIGTSKPTHYHVLYDQHKFTSVQLQKLVFDMCFSLAR
CTKPVSVVPPVLYAHLAAYRGRKYQETVETVTRSCPSPSLVQNSIKLHDKLKDQMFFV
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggaggaagcagtactagcaggggtagagcaagaggaagaggcagcgatgtc
ggcggaagccagggccgacgtgttggtggttgtgcccgcggggaaggtagaggaagtgga
gaaagaggtagaggaagagatgctgatgctggtggagcaaggggtaggggaagatttgct
gatgttggcgatagtggagcaagaagtagaggaagagatgttggtgctagtggagcatgg
ggtaggggaagagctactgatgctggagtttctgctgatggcgattgtggagcaagaagt
agtggaagagatgttggtgctagtggagcaagaggtagaggaggagatgctggtgtcggc
ggcgttggtggagcaagaagtagaggaagaaatagtgctggtacaagtggagatggtggt
ggtcgccatgctggagatcgataccagcaaaaccagaaggaagaagaatatcctgctctc
agtcctctgcgtcctgggaatcaaacgaggcgtttgtctagccaatctggtggtagtggc
agtggcactggcagccaatctagtggcgatcgcggtcagacggagacactatcttctccg
agtccgattaagtttggtcagggattttctatccctgtcgtaggcagaggacgtggagtt
tggggaggttctggcacagggttgaaggaacagtttcgtcctggtacaagttcgaatgct
cctcttgaatccgagacaccttcttcaggccgtggtgtaggaagaggaggtggagtttgg
gggagtgctcgcagcgcactgaaagtgcggttgccttctggtacaagtccgcctcattcg
accgagcccgagacgcctactttgggcgtaggaagaggtggagtttgggggagtcctgac
agaggattgaaaccgctaccttctgctacaagccagcctacagcggttgaatccgagact
tcttctttagatctcgttatttctgacatgcaaaagacgacaatctcaagttcgcagtct
caaccatccggaaacgcaaacaatctagttccaataaaacggcctccgcctaataaggat
ggtgacaaacgagaaaaagttcagctcttcgccaatcactttcttgtgacattcgatcct
gagataagtatacatcgctatgacgtaagtgtcttcccaaaggctggacgtgatcggtct
gtgaaaatccccaattctgatcttcgaacgatcatagagaagttactcagtgactatcct
acagagttaccaccatggaagaaaactgcctacgatggtcagaagattctgttttgtgcg
gaagaagaaaaaagaaaaggtggaatatttccggtggaagactacttaactgtcaacatt
gtaccatgcagtaacaaagattcgagtctgcgcaagttagatgaatacttacatggacgg
cttccgtcgagtgagaaccttcgtgaagtactacaggggttggatttggtgatgaaggag
aatccggctaggagtatgatttcttctggccggagcttttacgacactcgagagtctaaa
aacaccctgggcccggattgtgggttttataactatgaaggatttcagcatagcttaaag
cctacttctcagggtttatccttgtgcctagaccactctactctggctatgagtaaacgt
gtgccagttttggagttcctgaagaaacaaattacaagttttaatacatataattacttt
tgttcacccaacgatttcgagtcccgtagaaaatcagtcgaggaagtgttgaagggattg
aaagtttacgtgactcaccgtaaaactaaacaaaagttcgtcgtaaaagggttagctccc
gaaattgctgaatgtactaagtttgctgttgttgatccagctggtaagattcctgacagg
gaggttgaactgttgaagtattttaaggagaaatatggcattgaaattaagaagtcagcg
ttaccatgcttggatatagggagaagcgatagacgtaactatgtaccaatggagttctgt
caaattgttgagtggcaaaggtgtgataaaccgaaagatgaaggcatgaaaagaggtaat
gttaatttgatgaagccagatataagagcagataagatagcgaaaatagcgcgttcaaca
gatggtccttacggtggagaaatcgctaaaagctttaaaattgaagtcaacactagtatg
accactgtacgtggacgtctcattcagccacctgagttgaggctaggcaagaaaggaatt
aagaagagaaatatttttcaatccgaaaatttggattggaacctggttagaaggtcacta
gtgcaaggaacacgcataaataattgggttgtccttgacttcagcagtgaagaacagaag
caaggaaacaaactacaattcacaaatttcttgccgaagtttacaaggcgatgccgagaa
ttggatataagtatagcggaaaatccggcatatggagcaggatcaatggaaaatttctct
agcgtggaaacacttggtcagtttattgatatccagcttaaagctgctcgcccgaagctt
gaaggccccttgcaacttattctttgtgtaatgtctagaaaagacccaggttacaagtat
ctgaagtggatcgctgaaacaaaaataggtgttgtgacacagtgttgcttggctaatcgt
gcaaacaaagtagacggcaattatcttgccaaccttgctctcaagattaatgccaagctt
ggaggcataaatatgcaggtagagatggattgccatcttggcattctgactgtttcagag
catgtaatgtttataggggctgatgtcaaccatcctggctctcggaatacgaccacaagc
ccatccatagctgctgttgctgcctcaatgaattggcccactccttaccgctatgctgca
agagtgagaacccaagagtgccgtactgagaaaattgctgaattcgcggacatgtgtttg
gagcttattgaatgttatcaacgactcaataaagtcaaaccaaagaaaattatcatcttc
cgtgatggggtcagtgagggccagttcaatatggttctcaatgaagagttaagtggtctg
aaagaaaaacttgctcttcaaaagtatcacccaactgtcactcttattgttgcccagaag
cgccaccaaactcgtttgttccgtaagaattcccgtggattaatggataatgttctccct
ggcacagttgtggaggaaacaatcgttcacccatttgagtttgatttctacctgtgcagt
caccatggtagcattgggactagcaagcccactcactaccatgtcttgtatgatcagcac
aaatttacttctgtccaattacagaagctcgtctttgatatgtgtttttccttggctcgc
tgcaccaaacctgtctcggtggtcccaccggtgctctatgcccacctcgctgcatacaga
ggtagaaagtaccaggaaactgtagagacggtcactaggtcgtgcccctcaccttcactt
gtccagaattcaatcaaattgcacgataaactgaaggaccaaatgttttttgtttga
DBGET
integrated database retrieval system
