KEGG   Humulus lupulus (common hop): 133802656
Entry
133802656         CDS       T11341                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hlp  Humulus lupulus (common hop)
Pathway
hlp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hlp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133802656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hlp03019]
    133802656
   03041 Spliceosome [BR:hlp03041]
    133802656
Messenger RNA biogenesis [BR:hlp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133802656
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133802656
Spliceosome [BR:hlp03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133802656
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 133802656
NCBI-ProteinID: XP_062096990
LinkDB
Position
9:138021287..138025624
AA seq 438 aa
MDPSKKRKMEENGVVSAAAGDPFDPSHSKLSPEDARKLIDRFTPDQLLDILQEAVVRHPD
VLDSVRSIADPDTAQRKLFIRGLGWDTTTDGLRALFSAYGELEEAVVILDKATGKSKGYG
FVTFRHVDGALLALKEPSKKIDGRMTVTQLAAAGNSGSNTTTTASVADVSLRKIYVANVP
YEMASDKLLAHFALYGEIEEGPLGFDKQTGKCRGYALFVYKTPEGAQAALVDPVKTIEGR
QLNCKLAIDGKKGKQGGSGPDGVQSSVGGPGNAHGDGMGMAPPGGQFAGSGGMGSYTGFS
GPPSMGHHHPLNSSMGGGPGMSAVGNQAASSLGGSGSGYGGPFSGYGGPGSAGYGGLGGA
GGGAGGGLGGPGGAGGGGASSMYRLPPNSGGVPSGGYPESGHYGLSSSSAYPGQHHQQSG
TSPLPRGPPGGMYPPPYY
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggatccttctaagaagcgcaagatggaggagaacggcgtcgtatcagccgcagcagga
gaccccttcgacccctcccattccaaactctcgcccgaggacgctcgaaagctcatcgac
cgattcactcccgaccaactccttgatattctccaggaagccgtggttcgccaccccgac
gtactcgactccgttcgttcgattgcagatcccgataccgcccagcgcaagctctttatc
aggggtcttggttgggacaccacaaccgacggcctccgcgctctcttctccgcttacggg
gagttggaggaggctgttgttattctcgacaaggcgaccggaaagagtaagggttatgga
tttgttacgtttagacatgtcgatggcgctctccttgcccttaaagaaccgagtaagaag
attgacgggcgtatgacggtgactcagcttgcggcggctggtaattctgggtcgaacacc
accaccactgcctccgttgctgatgtttcgcttaggaagatttacgtcgccaatgtgccg
tacgaaatggcatcggataaacttttggcgcattttgccttgtacggtgagattgaggag
gggccgttagggtttgataagcagacgggtaagtgtaggggttacgcgttgtttgtttat
aagactccggagggagcacaggcggcgcttgtggatccggtgaagaccattgagggacgg
cagctcaattgtaaattggccattgatgggaagaaagggaagcagggtggctccggccca
gatggagttcagtcttcggtgggtggcccagggaatgctcatggagatgggatgggtatg
gctccacctgggggtcaatttgctgggtccgggggaatgggatcttacactgggttttct
gggccgccgtctatgggtcatcatcatcctttgaactcttcaatgggaggagggccggga
atgtctgcagtgggtaatcaagcggcgtcgtctttgggtggttctgggagtggctatggt
ggccctttcagtggttatggaggacctgggtcggccggctatggtggattaggaggtgct
ggaggtggagctggtggtggattaggcggtcctggtggtgcaggtggcggtggtgcttct
tctatgtacagactgcctccaaactcaggtggagttccctccggtgggtatccagagagt
ggacattatggcttatcatcttcgtctgcgtatccaggtcagcaccatcagcaatcagga
acatctcctttgccaaggggtcccccaggaggaatgtacccgccgccgtattattaa

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