Humulus lupulus (common hop): 133803171
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Entry
133803171 CDS
T11341
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
KO
K11088
small nuclear ribonucleoprotein D3
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133803171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlp03019
]
133803171
03041 Spliceosome [BR:
hlp03041
]
133803171
03032 DNA replication proteins [BR:
hlp03032
]
133803171
Messenger RNA biogenesis [BR:
hlp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
133803171
Spliceosome [BR:
hlp03041
]
Complex A
U1 snRNP components
Sm proteins
133803171
U2 snRNP components
133803171
Complex B
U1 snRNP components
133803171
U4/U6.U5 tri-snRNP components
133803171
Complex C
U2 snRNP components
133803171
DNA replication proteins [BR:
hlp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
133803171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
133803171
NCBI-ProteinID:
XP_062097118
LinkDB
All DBs
Position
X:complement(185635989..185638034)
Genome browser
AA seq
131 aa
AA seq
DB search
MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAKIKGKGASLGVGRGRAVAMRAKAQAAGRGA
AGRGAVPPVRR
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggagtttaggaataccagtaaagcttctccacgaagccgctgggcacgtggtg
acggtggagctcaagagcggtgagctctacagaggaagcatgatcgagtgcgaggataac
tggaactgtcagctcgagaacatcaccttcactgctaaggatgggaaggtctcgcagctt
gaacatgtttttataagaggcagcaaagttaggtttatggtgataccagacatgctaaag
aatgctccaatgttcaagcgtctagatgctaaaatcaagggtaagggcgcatcacttgga
gtcggaaggggtagagctgtagcaatgcgggctaaagctcaagctgcagggcgaggagca
gctggtagaggcgctgtaccacctgtacggaggtaa
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