Humulus lupulus (common hop): 133803224
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Entry
133803224 CDS
T11341
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133803224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hlp04131
]
133803224
Membrane trafficking [BR:
hlp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
133803224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
133803224
NCBI-ProteinID:
XP_062097182
LinkDB
All DBs
Position
X:211651005..211658588
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AA seq
789 aa
AA seq
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MIISNSIEDDEKWLAEGIAGIQHHAFYLHRALDANNLREALKYSAQMLSELRTSKLSPHK
YYELYMRAFDELKSLEMFFKDESRHGVSIVDLYELVQHAGNTLPRLYLLCTVGSVCIKSK
EVPAKDVLKDLVEMCRGVQHPIRGLFLRSYLSQVSRDKLPDIGSEYEGGADTVMDAVNFV
LQNFTEMNKLWVRMQHQGPHQLKEKLGKERRELRDLVGKNLHVLSQIEGVDLEMYKDTVL
PRVLEQVVNCKDDLAQYYLMECIIQVFPDDYHLQTLETLLSACPQLQPTVDTKTILSQLM
GRLSNYAASNADVLPEFLQVEAFSKLSSAIGRVIEAQVDMPIVGAITLYVSLLTFTLRVH
PDRLDYVDQVLGACVKKLAGNPKLEDNRATKQVVALLSAPLEKYDDTVTALTLSNYPRVM
DHLDNGTNKVMAMVIIESIMKNNTCISTADKVDVLFELIKGLIKDLDGTSIEELDEEDFN
DEQNAVARLIHMLYNDDPEEMLKMIFTVKKHVTNGGPTRLPFTIPPLVFSALRLVRQLQG
QDGEVVGEEVPTTPKKIFQLLNQIIEVLSSVPFPELALRLYLQCAEAANDCDLEPIAYEF
FTQAFVLYEEEIADSKAQVTAMHLIIGTLQRMSVFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDQGGIKDGERVLLCLKRALRIANAAQQMTSVTRGSSGPVTLFVEIL
NKYLYYFEKGNPHVTNTAIQGLVELIRNELESDSTTRTSDPFFSSTLRYIQFQKQKGGAM
GEKFASIKI
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatcatttcaaactcaatcgaagacgatgagaagtggctcgccgaaggcatcgccggc
attcagcaccatgctttttacttacatcgtgctttggatgccaataatcttagggaagca
ctcaaatactcggctcagatgctttccgagcttcgaacttctaagctttcgcctcacaaa
tactacgaactctatatgcgagcttttgacgaattgaaatcgctggagatgtttttcaag
gatgagagccggcatggcgtctccattgttgatctttacgaactggttcagcacgcggga
aacacattacccagattgtatcttttgtgtacggtggggtctgtgtgcatcaaatctaag
gaagttcctgctaaggatgtgctcaaagatcttgtggaaatgtgccgtggtgttcaacac
ccaatacgcgggctctttctgagaagctatctttctcaagttagtagagataagttgcct
gatattggttccgagtacgaaggtggtgctgatactgtcatggatgctgtgaattttgtg
ttacagaatttcacagagatgaataagctttgggttcgaatgcagcatcagggacctcat
cagttaaaagagaagctgggaaaggaaagaagggagcttcgtgaccttgtggggaaaaat
ctccatgttcttagtcagatagagggtgtcgaccttgaaatgtacaaggacactgtcctt
cccagggtcttggagcaggttgtcaattgtaaagatgatctggctcaatattacttgatg
gaatgcataattcaggtgtttcctgatgactaccacttgcagaccctggagacactgttg
agtgcttgtccccagcttcagccaacagttgataccaagacaattttatctcaattaatg
gggagattatcaaattacgctgcatctaatgctgatgtattacctgaatttttgcaagtg
gaagctttcagtaaattaagcagtgccattggcagggtgatagaagcacaggttgacatg
cctattgttggagccataacattgtacgtttcccttcttacatttactcttcgcgttcat
cctgatcgtcttgattatgttgatcaagtactgggagcatgtgtgaagaagctcgctgga
aatcctaagcttgaagataatagagcaactaaacaagttgttgcacttctaagtgctcca
ttagaaaaatatgacgatactgtcacagctttaacgctttccaattatcctcgtgttatg
gaccaccttgataatggaacaaataaagtcatggcaatggttatcattgaaagcataatg
aaaaacaatacttgcatctccactgctgataaggttgatgtgttgttcgaattaattaaa
ggtctcatcaaggatctggacggaacttctatagaagagcttgatgaggaagattttaat
gatgagcaaaatgctgttgctcgtctcatacacatgctttataatgatgacccagaagag
atgttaaagatgatatttactgtcaagaagcatgtaacgaatggagggccgactcgacta
ccttttactattcctcctcttgtattttctgcactcaggttggttaggcaattgcaaggc
caagatggagaggtagtgggagaagaagtgcccacgacacccaaaaaaatctttcagctt
ctaaaccagatcatcgaagttctttcttctgttccatttcctgaattggctttaaggttg
tacctgcaatgtgctgaggccgctaatgactgtgatcttgaacccattgcttacgaattt
ttcactcaagcatttgtactgtatgaagaagaaattgcggactctaaagcccaggtgact
gccatgcatttaataattgggactctccagagaatgagtgtatttggagttgagaatagg
gatactttaacacacaaggcaacagggtattcagcaaaactgttgaagaagcctgatcag
tgcagagctgtatatgcatgttcacatcttttttgggtcgatgatcaaggtggtatcaag
gacggagaaagggtcttgctttgccttaagcgtgccttgaggattgcaaatgctgctcaa
caaatgaccagtgttactcggggtagcagtggacctgtcactctctttgttgagatacta
aacaagtacctctactattttgagaaaggtaatccccatgtcacaaatactgcaattcag
gggctggtggaattaatcagaaatgaactcgaaagtgactctacaacccgaacctcagac
cctttctttagcagcacattgcgctacattcagttccagaaacagaaaggcggtgcaatg
ggtgagaaatttgcttctataaagatttga
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