KEGG   Humulus lupulus (common hop): 133803329
Entry
133803329         CDS       T11341                                 
Name
(RefSeq) THO complex subunit 5B
  KO
K13174  THO complex subunit 5
Organism
hlp  Humulus lupulus (common hop)
Pathway
hlp03013  Nucleocytoplasmic transport
hlp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hlp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133803329
  09122 Translation
   03013 Nucleocytoplasmic transport
    133803329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hlp03019]
    133803329
   03041 Spliceosome [BR:hlp03041]
    133803329
Messenger RNA biogenesis [BR:hlp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     133803329
Spliceosome [BR:hlp03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    133803329
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 133803329
NCBI-ProteinID: XP_062097312
LinkDB
Position
X:complement(141719838..141722289)
AA seq 483 aa
MEDGEVEEGMLVEEDVHTEADCKVEKSPCELLQKSKRSVEDIVAKMLSIKKEGNPKSELK
ELVTQMFIHFVTLRQANRSILLQEDRVKAETENAKAPVDFTTLQLHNLMYEKGHYIKAIK
ACKNFKSKYPNIELVPEEEFFRDAPEEIQNSVLSNDPAHNLMLKRLDFEHLQRKVLCTLR
EKLEHQKKSLSEIIANRQNFLSSLPSHLKSLKKASLPVQNQLGVLHTKKLKQHHSAELIP
PPLYVLYSQFLAQKEAFGEQIDLEILGSVKDAQTLTHQQANVDTGISTNLESSRMEDGAA
DEEEDGQRRSKRTRRIPAKDNLEQAGYQVHPLKVVLHVYDDDVSDPKSAKLITIKFEYLL
KLNIVCVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLLVGDSLVFDENRTSRPYKWA
QHLAGIDLLPELSPLLTRHGTPSSDVAKSDAVISDLSIYRQQNHVLTVVQRIRSRKKGQL
ALV
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggaagatggcgaggtcgaggaggggatgctggtcgaagaagatgtgcacacagaggct
gattgcaaagtggaaaagtcgccatgtgaattgcttcaaaagagcaagcgttcggttgag
gacatcgttgccaaaatgctttccattaagaaagagggaaaccccaaatccgagctcaaa
gaactagtcactcagatgttcatacactttgtcacacttcgccaggcaaatcgttctatc
ttgctccaagaggatcgtgtgaaagcggagacagaaaatgccaaggccccagtggatttc
acaaccctgcagcttcacaatctaatgtacgaaaagggtcactatattaaagccataaaa
gcttgcaaaaatttcaaatcaaaataccctaacattgagctcgtacctgaggaggagttt
tttcgtgatgcaccagaagagatacaaaattctgtattgtcaaatgatcctgcacacaat
ctcatgttgaagaggctcgatttcgaacatcttcagcgcaaagtgctatgcacacttcgc
gaaaaacttgaacatcagaagaaaagtctttcagagattattgcgaatcgccaaaatttc
ttgtctagtctcccatcacacctcaaatctcttaagaaagcttcgttgccagtacaaaac
caattaggggtgctgcatacaaagaaactgaagcagcaccactcggcagagttgattcca
cctcctctctatgtgctttactcacagttcttggcccagaaagaagcattcggtgaacaa
attgatctggagatacttggaagcgtgaaggatgcacaaactttaactcaccaacaagct
aatgtagacactggaatttctactaatctggagagttccagaatggaggatggagcagct
gatgaggaagaagatggccagagaaggagtaaacggacgaggaggattccagccaaggac
aacctggaacaggcaggatatcaagttcaccccctaaaagtggtgcttcatgtatatgat
gatgacgtctctgatcccaagtctgcaaaacttatcaccattaagtttgagtatttgttg
aagttgaacattgtatgtgttggaatagaaggatcccatgaaggacctgagaataacatt
ttgtgcaacttattccctgatgacaccggccttgagcttccacaccagtcagccaagctt
cttgttggtgattctcttgtatttgatgaaaatagaacttctcgtccatataaatgggcc
cagcacttagcaggaattgatttattgcctgagctatcacctttgcttactcgacatgga
actccaagcagtgatgttgcaaaaagtgatgcagtcatatctgacctttctatataccgc
cagcagaatcatgtgttgactgtagttcaaagaattcgatctcggaaaaagggtcaactg
gcccttgtgtga

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