Humulus lupulus (common hop): 133803861
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Entry
133803861 CDS
T11341
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03030
DNA replication
hlp03410
Base excision repair
hlp03420
Nucleotide excision repair
hlp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133803861
03410 Base excision repair
133803861
03420 Nucleotide excision repair
133803861
03430 Mismatch repair
133803861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hlp03032
]
133803861
03036 Chromosome and associated proteins [BR:
hlp03036
]
133803861
03400 DNA repair and recombination proteins [BR:
hlp03400
]
133803861
DNA replication proteins [BR:
hlp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
133803861
DNA Replication Termination Factors
ELG1-RFC complex
133803861
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
133803861
DNA repair and recombination proteins [BR:
hlp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
133803861
Check point factors
HRAD17(Rad24)-RFC complex
133803861
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
Rad17
AAA_22
RuvB_N
Mg_chelatase
AAA_16
AAA_11
AAA_5
AAA_assoc_2
AAA_14
SLFN-g3_helicase
AAA_2
PhoH
ResIII
nSTAND3
AAA_24
nSTAND_NTPase5
AAA_19
AAA_28
AAA_7
AAA_30
AAA_25
RNA_helicase
Parvo_NS1
NPHP3_N
CPG4
DNAX_ATPase_lid
DUF815
bpMoxR
TIP49
NB-ARC
Motif
Other DBs
NCBI-GeneID:
133803861
NCBI-ProteinID:
XP_062097986
LinkDB
All DBs
Position
X:208070420..208076739
Genome browser
AA seq
342 aa
AA seq
DB search
MATELQSFQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGGYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSRVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMT
SRVLYICNKEGLNLDAEALSTLSSISQGDLRRAITYLQSAARLFGSSISSRDLIGVSGVI
PLEVVEALFTACKSGNFDLANKEVNNIIAEGYPVSQMLSQLFEMVVEAADVSDEQKSRIC
KKLGEADKCLVDGGDEYLQLLDVASNTMRALCNMPEEFSYSI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctacagagttgcaaagttttcagccatgggtggagaaatatcgacctaagcaagta
aaagatgtggctcaccaggatgaggtggtccgggtcctcaccaacaccctcgaaaccact
aattgtccccacatgctcttctatggtccacccggcaccggaaaaaccaccaccgctctc
gccattgctcaccagctttttggacctgaactatacaagtctagagtgctggagcttaat
gcaagtgatgaccgtggtatcaatgttgttcggacaaaaataaaagattttgccgctgtt
gctgtgggttctggccaacgtcaagggggctacccttgtccaccttataagatcattatt
cttgatgaggccgattccatgactgaagatgctcagaatgcccttagacgtacgatggaa
acttattccagagtcacaaggttttttttcatatgtaattacatcagcaggatcatagag
cctcttgcgtctaggtgtgcaaagttcaggttcaagccactttcagaagaagtcatgacg
agccgggtattgtacatttgcaacaaagaaggtctgaatttggatgcagaggctctttca
actctaagttctatttcacaaggtgatcttcgccgggctattacatacttgcagtcagca
gcgcgcttgtttggatcgtcaatttcttctagggacctgattggtgtttctggggtcatc
ccacttgaggttgttgaggctctttttacagcttgtaaaagtggtaactttgatttggca
aataaggaagtcaataacattattgcagagggatatcctgtctctcagatgctttcacag
ttatttgagatggttgttgaagcagccgatgtatcagatgaacagaagtctagaatatgc
aagaaattgggcgaagctgataagtgtcttgttgacggtggggatgagtacttgcaactg
ctcgatgtggctagcaacacaatgcgtgctctttgtaacatgccagaagaattctcttat
agcatttag
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integrated database retrieval system
