Humulus lupulus (common hop): 133804819
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Entry
133804819 CDS
T11341
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
hlp Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlp03009
]
133804819
Enzymes [BR:
hlp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
133804819
Ribosome biogenesis [BR:
hlp03009
]
Eukaryotic type
Other ribosome biogenesis factors
133804819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
Ubie_methyltran
Methyltransf_31
PCMT
FtsJ
Methyltransf_4
RsmF-B_ferredox
NAD_binding_6
ASPP2-like_RA
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
133804819
NCBI-ProteinID:
XP_062098925
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All DBs
Position
X:2565398..2580477
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AA seq
624 aa
AA seq
DB search
MARTTPKAVRKKANPSSAAPASKSETRRQSNAERSAYFARREAAKVLRLVLQGDARRRAV
GSIKTLIYSPSVKNKKATFALVCETLKHLSVIKEVLNEAEILNSKWKKQDELVYIITYDV
LFGQKTLSTGDAEKFLWKRREALVSALASILKKKKLKNVQELLALYQTPDADVSKPRYVR
VNTLKLDVESAQQELEKRFSVQKDDMVPDLLILPAGTDLHKHPLVMNGSIFLQGKASSMV
AAALGPEPGWEVLDACSAPGNKTVHLAALMRGKGKIIACELNKERVKRLNDTIELSGASN
IKVLHGDFLSLSSDDPAYSKVRAILLDPSCSGSGTASVRLDHLLPSHATGHSSNDVDDFR
LNKLAAFQRKALEHALSFPSVERIVYSTCSIHEAENEDVVKSVLPLAASYGFELEAPFPQ
WPRRGLPIFEGCEKLLRTDPVEDREGFFIALFVRKKEEKPQTKDGHQKEILVPNVFSEFW
YMRGRKGKATLVPLNPEIEKSCNQIRKNKREAHKSVKMAHNEGDGRNVQTPGVVRGVQAQ
PNAERSLRDYVLPTLTGVQNSICPPTVEANNFEIKPAILQMVQSSVQFNGLPSEDPHTHL
SNFLELCGTFKYNGVSDDGSSHFL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcacaacaccgaaagctgtgaggaagaaggcgaacccctcctccgccgcaccg
gcctcgaagtcggaaactcgccgccagagcaacgccgagaggtcggcttacttcgctcgg
cgagaggcagcgaaggttctccggctcgttctccaaggcgacgctcggcgccgcgccgtt
ggctccatcaaaacgctcatttatagtccctcggtgaagaacaagaaggccaccttcgct
cttgtctgtgaaaccctaaaacatctttctgtcataaaggaagtgttgaatgaagctgag
attctcaatagcaagtggaagaagcaagatgagttggtttatataatcacgtatgatgtt
ctttttggtcagaaaactttatcaacaggagatgcagagaagtttctctggaagagaaga
gaggctctggtttctgctctagcttctattttgaagaagaaaaaattgaagaatgttcaa
gagttactagctctgtatcaaactccagatgctgatgtttcaaaacctcgttatgttcga
gtaaatactctgaagctggatgttgaatctgcacaacaggaactggagaaacgattctcg
gttcaaaaggatgacatggttcctgatttgttgattcttccagcgggaactgatttgcat
aaacatcctcttgtcatgaatggaagtatctttttgcaaggaaaggctagttctatggtg
gcagctgccctgggtcctgaaccaggatgggaggttcttgatgcatgttctgcccctggg
aacaaaaccgtgcaccttgctgctctgatgagaggaaaggggaagatcatagcttgcgag
ctaaataaagaaagggttaaacgtttgaatgacaccatcgaactctctggtgcttctaat
ataaaggttttgcatggagacttcttaagtttaagttcagatgatccggcctattccaag
gtccgagccattcttttggatccttcctgctctggctctgggactgcttctgtgagattg
gatcatcttctcccttctcacgccacaggtcactcaagcaatgatgttgacgattttaga
ctgaacaagctcgcagctttccaaagaaaggctctggagcacgctctgtcctttccatca
gtggagagaatagtctacagcacttgctccatccacgaggctgagaacgaggacgtagtc
aaatcagttctccctcttgcagcatcctacggattcgaactcgaagctccatttcctcag
tggccccgccgtggtcttcccatcttcgaaggctgcgaaaagttgcttcgaaccgatccg
gttgaggacagggaagggttcttcattgccctgtttgtcaggaagaaggaagagaagccc
caaacaaaagatggccaccagaaagagattctagttccgaatgtgttcagtgaattttgg
tatatgcgtggcagaaaaggaaaagccacacttgttcctttgaatcccgagattgaaaag
tcctgcaatcaaatcagaaagaataagagagaggcccataaatctgtaaagatggcacat
aatgaaggggatggcaggaatgttcaaactcctggagttgtacgaggggttcaggctcaa
cccaatgctgagaggagcctgcgagattatgtgctacccactctgacgggagtacaaaat
agtatatgcccaccaactgtagaggccaacaactttgaaataaagcccgccattctacaa
atggtgcagtcctctgtgcaattcaatgggttgccctctgaagatcctcacacccatttg
tctaactttctggagttgtgtggaaccttcaaatataatggggtgagtgatgacggctct
tcccattttctctaa
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