Humulus lupulus (common hop): 133805026
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Entry
133805026 CDS
T11341
Name
(RefSeq) protein ALTERED SEED GERMINATION 2 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
hlp
Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hlp04121
]
133805026
Ubiquitin system [BR:
hlp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133805026
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
ANAPC3
TPR_2
Motif
Other DBs
NCBI-GeneID:
133805026
NCBI-ProteinID:
XP_062099108
LinkDB
All DBs
Position
X:72961770..72984104
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AA seq
765 aa
AA seq
DB search
MDTWPFHDGNIHDLLHRRYLHGSQDSNRSLQIHSSLIRRLSQEKELEGHQGCVNAIAWNS
SGSLLISGSDDTRGHMGGFVSQHLMINIWSYSGRNLLHSLETGHCANIFCTKFIPETGDE
LVVSGAGDAEVRLFNLSRLSGRGADDNAISPSATYQCHTRRVKKLAVEVGNPNVVWSASE
DGTLRQHDFREGSSCPPAGSSHQECRNILLDLRCGAKRSLADPPRQNFALKSCDISATKP
HLLLVGGSDAFARLYDRRMLPPLSSSQKKMPPPPCVDYFCPMHLSDREQSSLHLTHVAFS
PDGEEVLLSYSGEHVYLMDTNHAGDSSMQYSPADVSRLTSFTLDRGEPTSDVCLKGHSKE
RSANLDMSKKLIQIAERSLEGNMNYFYGIEACNEVLDGYGQVIGLALKHECLCMRAALLL
KRNWKNDVPMAIRDCHNAQKIDGSSFRAHYYMSEALSQLGKHKEALDFACAAQNLAPSNF
DVEERVERVKKDLAAGEAERNKKENEGLLRSKPRGEAMASLSDIFYRVEANSNDGPRSER
EDSDYDEELELDFDTSMSGDEEHDVEPNILHGSLNLRIHRKSDSARESGGANGSCGSPSS
SSCNDRTPYQPGIAIDMKQRYVGHCNVGTDIKQANFLGQRGEYVASGSDDGRWFIWEKKT
GRLIKMLHGDDAVVNCVQSHPFDCAVATSGIDNTIKIWTPTASVPSTVGSGTAGPESADF
LNVMEGNQHRLGRNRDAFLGFEILERFRVHEFTEGNLHPFECAQS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggacacctggccttttcacgacggtaacatccacgatttgcttcacagacgttacctc
catggctctcaagactcaaatcgcagcttgcagattcattcatcactgatccgaaggctt
tcgcaggaaaaagagttggaggggcatcaaggttgtgttaatgctattgcttggaattcc
agcggttcacttttgatatctggatcggatgacacgcgggggcatatgggtggatttgta
tctcaacatttaatgattaatatatggagctactctggcaggaaccttttgcattcttta
gagactgggcactgtgcaaatatattttgtacaaaatttattcccgagactggtgatgaa
cttgtggtctctggagctggagatgcagaagttcggttatttaatttatctcgattaagt
gggagaggagctgatgacaatgctatttctccatcagctacatatcaatgtcacacaaga
agagtaaaaaagttggctgttgaagttggaaaccccaacgttgtatggagcgcaagtgaa
gatgggacgttgagacagcatgattttcgagaaggctcttcatgtcctcctgctggatct
tctcatcaagaatgtcgcaatattttgcttgacttgcggtgtggagcaaagaggtctcta
gctgatcctcccagacaaaattttgctttaaaatcctgtgatatcagtgccaccaagcct
catttgctcctagttggtgggagtgatgcatttgcacggttgtacgacagaaggatgctg
ccaccgttgtcctcaagtcagaaaaagatgccacctcctccttgtgttgactatttttgt
ccaatgcatctttctgatcgtgaacagtcaagcttgcatctaactcatgttgcgtttagt
cctgatggagaagaggttctacttagttatagtggagagcatgtctatctgatggataca
aatcacgcaggtgatagttctatgcagtatagtcctgcagatgtttcccggctgacgagc
ttcacactcgatagaggtgaaccgacatctgatgtctgcctgaagggtcattctaaggag
agaagtgctaatcttgacatgagtaagaagctaatccaaattgctgaaagatccttagag
gggaatatgaattacttctacggtattgaggcttgcaatgaggtgttggatggatatggt
caagttattggactggcattgaagcatgaatgtctctgtatgcgtgctgcgttgttgctg
aagcggaattggaaaaatgatgttcccatggcgattagagattgtcacaatgctcaaaag
attgatggctcctcattcagggctcattactacatgtctgaagctctgtcacagttaggc
aaacataaagaagctctagattttgcttgcgctgctcaaaatttggctccttccaatttt
gatgtagaagaaagagttgagagagttaaaaaggaccttgctgcaggtgaagcagaaaga
aataagaaagaaaatgaaggacttttgaggtccaaacctcgaggtgaagcaatggcttca
ttaagtgacatattttatcgggtagaggctaatagtaatgatggcccaagatctgaaaga
gaagattctgattatgacgaggaattggaattagactttgacacgtcaatgtcaggtgat
gaggagcatgatgttgaacccaatattctacatggaagtttaaatttaagaatccatcga
aaaagtgattcagctagagaaagtggtggtgcaaatggctcgtgtggatctccctcatca
tcatcctgtaatgacagaacaccgtatcagcctgggatagctattgatatgaaacaaaga
tatgttggccactgtaatgtggggactgacatcaagcaggccaattttctgggtcaaaga
ggtgaatatgttgctagtggaagtgatgatggcagatggtttatttgggagaagaaaact
ggcagattaataaaaatgctccatggagatgatgcagttgtcaactgtgtgcagtctcac
ccttttgactgtgctgttgctaccagcgggattgataacacaataaagatttggactccg
actgcttcagtcccctcaactgtaggtagtggaacagcagggccagaaagtgctgacttt
ctaaatgtcatggaaggcaaccaacatagattaggccgcaatcgtgatgcattcctgggt
tttgaaattctggagcgttttcgagtgcatgagttcactgaaggaaacttgcatccattt
gagtgtgctcagagctaa
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