Humulus lupulus (common hop): 133805691
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Entry
133805691 CDS
T11341
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp03030
DNA replication
hlp03410
Base excision repair
hlp03420
Nucleotide excision repair
hlp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133805691
03410 Base excision repair
133805691
03420 Nucleotide excision repair
133805691
03430 Mismatch repair
133805691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hlp03032
]
133805691
03036 Chromosome and associated proteins [BR:
hlp03036
]
133805691
03400 DNA repair and recombination proteins [BR:
hlp03400
]
133805691
DNA replication proteins [BR:
hlp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
133805691
DNA Replication Termination Factors
ELG1-RFC complex
133805691
Chromosome and associated proteins [BR:
hlp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
133805691
DNA repair and recombination proteins [BR:
hlp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
133805691
Check point factors
HRAD17(Rad24)-RFC complex
133805691
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
AAA_lid_RFC1
Rad17
COMPASS-Shg1
RuvB_N
Motif
Other DBs
NCBI-GeneID:
133805691
NCBI-ProteinID:
XP_062099839
LinkDB
All DBs
Position
X:32297020..32301074
Genome browser
AA seq
676 aa
AA seq
DB search
MPRSAPIPPSLSSSSCSPKVSNLGSRRSRQRHRQRDRLHRSSPSSKKALATPPPHKSFGR
FLPFGKRRSSSSNNIPQKAELTKANLEAHLARTRAEEEDDNQKNSPKGYSPYYRGLLANT
TPTQSYLGPGGGKQAVPESHVAPPPPPPPTSAAFTRSSFASTIIIRLQEALGSSCFPFKS
TKNKEKDKNDDDDDGYQPPVAPAMASPGLRLNSTATNSTIAVVDRPPLLSMGRGDDSDGE
KKPLRESFQGPAHDHDHDLHDHQAEPPLSTEHHEPTVVRRPSDESEVLPGQRIFVWADKY
RPKALEDFICNRNKAIELQLLARTGECGHFIFQGPAGVGKRTMIWAMLREAFGPDSIQAS
EEFKVFNLQGEEVGSIEVLVKNSPRLLEVNISDIKGYEKHVIYELIKENISQSISYNNTS
LPCKPPDNCRAIIFYGVEKLSSDAILYIKWLLERYNACNKIFFCCSDLSKLQAIKNLCTV
VQLLPPSRTEIIKVLKLIAEKEGIDVPQKLAEKITDASKKNLRQAIRSFEATWLKHYPFT
EDQEVLNGWEDDIANIAKNMIEEQGPKLLYIIRGKLQNLVEHDVSPDLIFQSLVEEVKKH
LDNETLKRRVHNLYVEYSKTDESIFESDKALAHPRKSTNAQQFMRIEEFIAKFMSCYKTE
ATKIMQQENEDHNSKI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgccgagatcagccccgattccgccctcgttgtcatcatcatcttgctctcccaaagtg
tccaatcttggtagcaggcgatcgcgccagcgccaccgccagcgcgatcgcctgcaccga
tcgtcaccatcgtccaagaaagcactcgcaacacctcctcctcacaaatctttcggaaga
tttttacctttcggaaagcgcagatcgtcatcaagtaacaacattcctcagaaagcggaa
ctcactaaagcaaacctcgaagctcatctcgctaggactagagcagaagaggaggacgac
aaccaaaagaatagccccaaaggatacagtccttactaccgaggacttttagcaaacact
acgcctactcagagctatttaggccccggcggaggaaaacaagctgtgcccgagagccat
gtcgctcctcctcctccacctcctcctacttctgctgccttcactagatcatcattcgct
tccaccatcatcatcaggcttcaagaagcgcttgggagttcttgctttccgttcaaatca
accaagaataaggaaaaagacaaaaacgacgacgatgatgatggttatcagcctccggtg
gcgccggcaatggcgtcccccggactgagactaaacagtacggctacgaattcaactatt
gctgtcgttgaccgccctccgttgttgtcaatggggaggggtgacgacagtgatggtgaa
aagaagccattgagggagagttttcaaggaccagctcatgatcatgatcatgatcttcat
gaccaccaagctgagcctcctttgtccactgaacatcatgagccgacggtagtccggcgg
ccgtccgacgaatcagaggtattaccaggacagaggatatttgtatgggctgacaagtat
cggcctaaagctttggaagatttcatatgcaatcggaacaaagcaattgaactccagctt
ctggcaaggacgggagaatgtggacatttcatatttcaagggccagcaggtgtgggcaag
aggaccatgatctgggctatgcttcgagaggcttttggtcccgattctatacaagccagt
gaagaattcaaagttttcaatttacagggtgaagaagtaggaagtattgaagtactagtg
aagaattctccacggctattagaagtaaatatttcagacattaaagggtatgagaagcat
gtcatctatgaactcatcaaggaaaatatatctcagagcatttcctataataacacctct
ctgccatgcaaaccaccagacaactgccgagcaataatcttttatggagtggaaaagctg
tcatcggacgccattctatacattaagtggctgttggaaaggtataatgcgtgtaataag
atcttcttctgctgctccgatctatcaaagcttcaggccatcaaaaacctttgcactgtg
gttcagcttttacccccttcaaggaccgagataattaaagttttgaagctcattgctgag
aaagaagggatagatgtgcctcaaaaattagctgaaaagattacagatgcgtctaaaaaa
aatcttcgccaagccattcgttcattcgaggcaacctggctaaaacattatccctttaca
gaagatcaggaagttctgaatggttgggaagatgatattgccaacattgctaagaacatg
attgaagagcaaggcccaaaactgctatatatcatccggggaaagcttcaaaatctcgta
gagcatgatgtgtctcctgatcttattttccagtcactggtggaagaagtgaagaagcat
ttagataatgagacattgaagcgccgggttcataatctgtacgtggaatacagtaaaaca
gatgagagtatttttgagagtgacaaagcgcttgcacatccaagaaagagtactaatgcc
cagcagttcatgaggattgaagagtttatagccaaattcatgagctgctacaagactgaa
gctaccaaaatcatgcagcaggaaaatgaagatcacaatagtaaaatataa
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